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See other PRPF31 CNV Assays ›
Gene Symbol
PRPF31
Assay Reference Genome
Location

Chr.19:54126582 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01672584_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 26121

Gene Name:

 pre-mRNA processing factor 31

Gene Aliases:

 NY-BR-99, PRP31, RP11, SNRNP61

Location:

 Chr.19:54115410-54131719 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRPF31 NM_015629.3 NP_056444.3
XM_006723137.3 XP_006723200.1
AB593024.1
AB593025.1
AF308303.1 AAG48270.1
AK098547.1 BAC05329.1
AK301709.1
AL050369.1 CAB43677.1
AY040822.1 AAK77986.1
BC117389.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion TARM1 OSCAR VSTM1 TFPT PRPF31 NDUFA3
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss LENG1 MBOAT7 TFPT TMC4 PRPF31 NDUFA3 CNOT3
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion LENG1 MBOAT7 OSCAR TFPT TMC4 PRPF31 NDUFA3 CNOT3 TSEN34
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR520H MIR526B MIR517B MIR516B2 VN1R2 ZNF845 BIRC8 RPS9 MIR372 MIR516B1 MIR498 MIR520E MBOAT7 LILRA6 LILRB2 DPRX MIR515-2 MIR519D CNOT3 MIR519B MIR519A1 MIR518E MIR521-1 CACNG8 MIR518D MIR519E MIR519C MIR523 MIR520D MIR518C PRKCG MIR520B MIR518F MIR517A VSTM1 MIR520C CACNG6 MIR525 LOC284379 LILRB3 TPM3P9 MIR522 LOC105372457 MIR518B NLRP12 LILRB5 TMC4 MIR935 MIR371B PRPF31 MIR518A1 MIR527 MIR516A2 ZNF677 LILRA5 MIR373 MIR1323 MIR526A2 ZNF813 MIR1283-1 MIR520F MIR519A2 MIR371A TARM1 ZNF765 MIR520A MIR521-2 MIR520G MIR515-1 MIR512-2 TFPT MIR518A2 ZNF665 ZNF525 TSEN34 LENG1 MIR517C OSCAR MIR1283-2 MYADM MIR524 VN1R4 ZNF331 ZNF761 ZNF818P MIR512-1 CACNG7 MIR526A1 FAM90A27P NDUFA3 MIR516A1 MIR4752
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TARM1 OSCAR TFPT PRPF31 NDUFA3
nsv2545 Chr.19:54122949 - 54142607 on Build GRCh38 Insertion PRPF31 CNOT3

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