Genomic Map
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Target Gene Details
Entrez Gene ID: | 83596 |
Gene Name: | BCL2 like 12 |
Gene Aliases: |
- |
Location: |
Chr.19:49665072-49673916 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| BCL2L12 | NM_001040668.1 | 1 | 441 | NP_001035758.1 |
| NM_001282516.1 | 1 | 441 | NP_001269445.1 | |
| NM_001282517.1 | 1 | 441 | NP_001269446.1 | |
| NM_001282519.1 | 1 | 441 | NP_001269448.1 | |
| NM_001282520.1 | 1 | 441 | NP_001269449.1 | |
| NM_001282521.1 | 1 | 441 | NP_001269450.1 | |
| NM_138639.1 | 1 | 441 | NP_619580.1 | |
| NR_104200.1 | 1 | 441 | ||
| NR_104201.1 | 1 | 441 | ||
| NR_104202.1 | 1 | 441 | ||
| NR_104203.1 | 1 | 441 | ||
| NR_104204.1 | 1 | 441 | ||
| NR_104205.1 | 1 | 441 | ||
| XM_017027345.1 | 1 | 511 | XP_016882834.1 | |
| XM_017027346.1 | 1 | 511 | XP_016882835.1 | |
| BC104004.1 | AAI04005.1 | |||
| BC104005.1 | AAI04006.1 | |||
| BC104006.1 | AAI04007.1 |
Target Gene Details
Entrez Gene ID: | 3661 |
Gene Name: | interferon regulatory factor 3 |
Gene Aliases: |
IIAE7 |
Location: |
Chr.19:49659569-49665875 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| IRF3 | NM_001197122.1 | NP_001184051.1 | ||
| NM_001197123.1 | NP_001184052.1 | |||
| NM_001197124.1 | NP_001184053.1 | |||
| NM_001197125.1 | NP_001184054.1 | |||
| NM_001197126.1 | NP_001184055.1 | |||
| NM_001197127.1 | NP_001184056.1 | |||
| NM_001197128.1 | NP_001184057.1 | |||
| NM_001571.5 | NP_001562.1 | |||
| NR_045568.1 | 1 | 294 | ||
| XM_006723197.1 | XP_006723260.1 | |||
| XM_006723198.1 | XP_006723261.1 | |||
| XM_006723201.1 | XP_006723264.1 | |||
| XM_006723202.2 | XP_006723265.1 | |||
| XM_017026766.1 | XP_016882255.1 | |||
| XM_017026767.1 | XP_016882256.1 | |||
| AK057577.1 | 1 | 276 | ||
| AK292027.1 | 1 | 276 | ||
| AK314421.1 | ||||
| BC000660.2 | AAH00660.1 | |||
| BC009395.2 | AAH09395.1 | |||
| CB961512.1 | ||||
| DA938709.1 | 1 | 185 | ||
| DA999381.1 | 1 | 294 | ||
| HM357932.1 | ||||
| HM357933.1 | ||||
| HM357934.1 | ||||
| HM357935.1 | ||||
| HM357936.1 | ||||
| HM357937.1 | ||||
| Z56281.1 | CAA91227.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv469715 | Chr.19:49572544 - 49730286 on Build GRCh38 | Gain+Loss |
 ADM5
MIR5088
BCL2L12
CPT1C
PRR12
PRRG2
RRAS
NOSIP
IRF3
SCAF1
PRMT1
|
| nsv833865 | Chr.19:49572545 - 49730286 on Build GRCh38 | Gain+Loss |
ADM5
MIR5088
BCL2L12
CPT1C
PRR12
PRRG2
RRAS
NOSIP
IRF3
SCAF1
PRMT1
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
BCL2L12
ZNF114
FAM83E
RRAS
AP2A1
MIR4749
SCAF1
SNAR-C2
CYTH2
SIGLEC16
SNRNP70
NTN5
SPHK2
SNAR-C5
SNAR-A13
C19orf73
PRMT1
SNAR-A4
GYS1
IL4I1
TMEM143
CABP5
LOC101928295
BAX
SNAR-A12
SLC17A7
LMTK3
ATF5
RPS11
MIR6800
SLC6A16
SNAR-G2
SNAR-A11
MAMSTR
SNORD34
GRWD1
RUVBL2
LHB
SULT2B1
CGB8
SEC1P
NOSIP
CGB3
ALDH16A1
SPACA4
HSD17B14
NUP62
KDELR1
FLJ26850
CARD8
KCNJ14
SNAR-A8
SNAR-A3
SNAR-A9
TRPM4
RASIP1
BCAT2
SNAR-A6
FUZ
PRR12
TBC1D17
DKKL1
FTL
BSPH1
FCGRT
SNAR-A1
PRRG2
EMP3
SNAR-A14
TSKS
PIH1D1
NUCB1-AS1
SNAR-A2
CD37
CCDC155
PPFIA3
PNKP
RPL13A
PTOV1
ADM5
FUT1
MIR5088
LOC100287477
MIR150
NTF4
MIR4324
PLEKHA4
PLA2G4C
MIR6799
MED25
GRIN2D
SNAR-A10
SIGLEC11
SNORD35B
SNORD32A
MIR4750
CGB5
SNAR-C1
GFY
SNAR-C4
SNAR-C3
DBP
SNAR-A7
DHDH
TULP2
FUT2
LOC101059948
IZUMO1
RPL18
SYNGR4
FLT3LG
ZNF473
MIR4751
PTOV1-AS1
LOC105372430
CGB2
CA11
VRK3
SNORD35A
SNAR-B2
SNORD33
SNAR-D
CPT1C
KCNA7
NUCB1
PTH2
TEAD2
AKT1S1
PPP1R15A
SNAR-G1
HRC
PLA2G4C-AS1
PTOV1-AS2
LIG1
ELSPBP1
CGB1
SNAR-B1
C19orf68
RCN3
CARD8-AS1
SNAR-A5
LOC105447645
MIR6798
LIN7B
CGB7
CCDC114
IRF3
FGF21
|
| nsv817854 | Chr.19:49618821 - 49726387 on Build GRCh38 | Gain |
ADM5
MIR5088
BCL2L12
CPT1C
PRR12
RRAS
IRF3
SCAF1
PRMT1
|
| nsv953600 | Chr.19:49555044 - 49938043 on Build GRCh38 | Deletion |
BCL2L12
MIR4751
PTOV1-AS1
RRAS
AP2A1
MIR4749
NOSIP
PNKP
SCAF1
PTOV1
ADM5
MIR5088
NUP62
CPT1C
AKT1S1
PRMT1
MIR6799
MED25
IL4I1
FUZ
PRR12
PTOV1-AS2
MIR4750
TBC1D17
ATF5
MIR6800
PRRG2
IRF3
TSKS
|
| nsv833864 | Chr.19:49551790 - 49733819 on Build GRCh38 | Gain |
ADM5
MIR5088
BCL2L12
CPT1C
PRR12
PRRG2
RRAS
NOSIP
IRF3
SCAF1
PRMT1
|
| nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion |
BCL2L12
PTOV1-AS1
RRAS
AP2A1
SNORD35A
NOSIP
SCAF1
SNORD33
RPL13A
ADM5
MIR5088
MIR150
CPT1C
PRMT1
MIR6799
MED25
FUZ
PRR12
SNORD35B
SNORD32A
RCN3
FCGRT
RPS11
MIR6800
PRRG2
IRF3
TSKS
SNORD34
|
| nsv828578 | Chr.19:49560777 - 49680548 on Build GRCh38 | Loss |
BCL2L12
PRR12
PRRG2
RRAS
NOSIP
IRF3
SCAF1
PRMT1
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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