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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1300011 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01717608_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 MIR6726 ACAP3 SCNN1D
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SDF4 LOC101928626 MIR6726 TTLL10-AS1 MIR6859-2 LOC105378591 MMP23A CDK11B ATAD3A LOC148413 MXRA8 PERM1 LINC01128 CDK11A SKI FAM132A AURKAIP1 LOC100506504 TTLL10 SCNN1D FNDC10 LINC01342 FAM41C LOC105378947 ANKRD65 TMEM88B MIR6723 WASH7P ATAD3B LOC100134822 B3GALT6 OR4F5 MMP23B SLC35E2B C1orf159 PUSL1 LOC105378949 HES4 LOC100288175 LOC107984841 LOC100130417 NOC2L TMEM240 PLEKHN1 DDX11L1 GNB1 LOC100287934 LOC100133331 MORN1 UBE2J2 SAMD11 LOC105378948 VWA1 LINC00115 FAM138A LOC107985728 LOC100288069 LOC105378589 LOC729737 TMEM52 ISG15 CPSF3L TNFRSF18 PRKCZ AGRN MIR1302-2 MIB2 SLC35E2 KLHL17 LOC105378592 LOC284600 FAM87B OR4F16 SSU72 ACAP3 MTND1P23 NADK FAAP20 MIR6727 TNFRSF4 MTND2P28 MIR200A OR4F29 TAS1R3 LOC100132287 LOC100129534 CCNL2 LOC102725121 GABRD ATAD3C DVL1 CFAP74 MIR6808 LOC107985729 CPTP CALML6 LOC102724312 MIR429 MIR200B MIR6859-1 RNF223 MRPL20
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss UBE2J2 MIR6726 B3GALT6 SDF4 FAM132A ACAP3 SCNN1D
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss PUSL1 MIR6726 MIR6808 CPTP DVL1 TAS1R3 ACAP3 CPSF3L MIR6727
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss MIR6726 ACAP3 SCNN1D
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF4 SDF4 FAM132A MIR200A TTLL10 SCNN1D TNFRSF18 MIR429 MIR200B LINC01342 UBE2J2 MIR6726 B3GALT6 TTLL10-AS1 C1orf159 RNF223 ACAP3
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TNFRSF4 SDF4 MIR200A TAS1R3 UBE2J2 MIR6726 LOC105378948 B3GALT6 TTLL10-AS1 C1orf159 PUSL1 CPTP FAM132A LOC100288175 TTLL10 SCNN1D CPSF3L TNFRSF18 MIR429 AGRN MIR200B LINC01342 RNF223 ACAP3 MIR6727
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MXRA8 PUSL1 MIR6726 MIR6808 CPTP DVL1 AURKAIP1 TAS1R3 ACAP3 SCNN1D CPSF3L MIR6727
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss TMEM240 PLEKHN1 LOC100287934 SDF4 UBE2J2 SAMD11 MIR6726 LOC105378948 VWA1 TTLL10-AS1 LINC00115 LOC107985728 MMP23A CDK11B LOC100288069 ATAD3A LOC148413 MXRA8 PERM1 LINC01128 CDK11A ISG15 FAM132A AURKAIP1 TTLL10 SCNN1D CPSF3L TNFRSF18 AGRN FNDC10 LINC01342 MIB2 SLC35E2 KLHL17 LOC284600 FAM87B SSU72 ACAP3 NADK MIR6727 FAM41C TNFRSF4 MIR200A TAS1R3 ANKRD65 TMEM88B ATAD3B CCNL2 B3GALT6 ATAD3C DVL1 MMP23B SLC35E2B C1orf159 PUSL1 MIR6808 LOC107985729 HES4 CPTP LOC100288175 LOC102724312 MIR429 LOC100130417 MIR200B NOC2L RNF223 MRPL20
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion TMEM240 TNFRSF4 SDF4 MIR200A TAS1R3 ANKRD65 TMEM88B ATAD3B UBE2J2 MIR6726 VWA1 CCNL2 B3GALT6 TTLL10-AS1 ATAD3C DVL1 MMP23B C1orf159 CDK11B ATAD3A LOC148413 MXRA8 PUSL1 MIR6808 LOC107985729 CPTP FAM132A AURKAIP1 TTLL10 LOC102724312 SCNN1D CPSF3L TNFRSF18 MIR429 FNDC10 MIR200B LINC01342 MIB2 SSU72 ACAP3 MRPL20 MIR6727
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MXRA8 PUSL1 MIR6726 MIR6808 CPTP DVL1 TAS1R3 ACAP3 SCNN1D CPSF3L MIR6727
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MXRA8 PUSL1 MIR6808 CPTP AURKAIP1 TAS1R3 SCNN1D CPSF3L UBE2J2 MIR6726 DVL1 ACAP3 MIR6727
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain PLEKHN1 TNFRSF4 SDF4 MIR200A TAS1R3 ANKRD65 TMEM88B UBE2J2 SAMD11 MIR6726 LOC105378948 CCNL2 B3GALT6 TTLL10-AS1 DVL1 LOC107985728 C1orf159 LOC148413 MXRA8 PERM1 PUSL1 MIR6808 HES4 ISG15 CPTP FAM132A LOC100288175 AURKAIP1 TTLL10 SCNN1D CPSF3L TNFRSF18 MIR429 AGRN LOC100130417 MIR200B LINC01342 KLHL17 NOC2L LOC284600 RNF223 ACAP3 MRPL20 MIR6727
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain PUSL1 TNFRSF4 SDF4 FAM132A MIR200A TTLL10 SCNN1D CPSF3L TNFRSF18 MIR429 MIR200B UBE2J2 MIR6726 B3GALT6 TTLL10-AS1 ACAP3 MIR6727

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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