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See other SNRNP200 CNV Assays ›
Gene Symbol
SNRNP200
Assay Reference Genome
Location

Chr.2:96284413 on build GRCh38
Cytoband
2q11.2
Assay ID Hs01720115_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 23020

Gene Name:

 small nuclear ribonucleoprotein U5 subunit 200

Gene Aliases:

 ASCC3L1, BRR2, HELIC2, RP33, U5-200KD

Location:

 Chr.2:96274336-96321893 on Build GRCh38

Assay Gene Location:

 Within Exon 33
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNRNP200 NM_014014.4 31 4469 NP_054733.2
XM_017003603.1 33 5299 XP_016859092.1
AB018331.2 29 4007 BAA34508.2
AF085356.1 1 311 AAD40191.1
AK021418.1 1 462
AK023840.1 25 3480 BAB14698.1
AK024391.1 25 3550 BAB14906.1
AK090671.1 BAC03499.1
AK303465.1 2 306
AK303663.1
AL831994.1 22 3185
AY572488.1 31 4415 AAS78571.1
BC007577.1 13 1853 AAH07577.1
BC065924.1 24 3392 AAH65924.1
BC112891.1 25 3590
BC131784.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834305 Chr.2:96183160 - 96353738 on Build GRCh38 Gain LOC105373495 SNRNP200 CIAO1 ITPRIPL1 STARD7 TMEM127 STARD7-AS1 NCAPH
nsv508155 Chr.2:96268957 - 96472565 on Build GRCh38 Deletion LOC105373495 SNRNP200 CIAO1 ITPRIPL1 NCAPH
dgv607e201 Chr.2:95855884 - 97561622 on Build GRCh38 Deletion LOC105373495 SEMA4C CIAO1 ANKRD23 ITPRIPL1 KANSL3 NEURL3 STARD7 CNNM3 TMEM127 NCAPH ASTL SNRNP200 ARID5A MIR3127 LOC100506123 FAM178B ADRA2B FAHD2B FAHD2CP STARD7-AS1 ANKRD36C LOC107984110 ANKRD39 GPAT2 DUSP2 CNNM4 LOC100506076 LOC101927053 FER1L5 LOC105373496 LMAN2L ANKRD36B LOC653924 ANKRD36
nsv1135873 Chr.2:95981454 - 97579645 on Build GRCh38 Deletion LOC105373495 SEMA4C CIAO1 ANKRD23 ITPRIPL1 KANSL3 NEURL3 STARD7 CNNM3 TMEM127 NCAPH ASTL SNRNP200 ARID5A MIR3127 LOC100506123 FAM178B ADRA2B FAHD2B FAHD2CP STARD7-AS1 ANKRD36C LOC107984110 ANKRD39 GPAT2 DUSP2 CNNM4 LOC100506076 LOC101927053 FER1L5 LOC105373496 LMAN2L ANKRD36B LOC653924 ANKRD36
esv3425717 Chr.2:95859900 - 97515905 on Build GRCh38 Duplication LOC105373495 SEMA4C CIAO1 ANKRD23 ITPRIPL1 KANSL3 NEURL3 STARD7 CNNM3 TMEM127 NCAPH ASTL SNRNP200 ARID5A MIR3127 LOC100506123 FAM178B ADRA2B FAHD2B FAHD2CP STARD7-AS1 ANKRD36C LOC107984110 ANKRD39 GPAT2 DUSP2 CNNM4 LOC100506076 LOC101927053 FER1L5 LOC105373496 LMAN2L ANKRD36B LOC653924 ANKRD36

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