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Gene Symbol
SLC15A4
Assay Reference Genome
Location

Chr.12:128794365 on build GRCh38
Cytoband
12q24.33
Assay ID Hs01721623_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 121260

Gene Name:

 solute carrier family 15 member 4

Gene Aliases:

 FP12591, PHT1, PTR4

Location:

 Chr.12:128793194-128823996 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC15A4 NM_145648.3 NP_663623.1
XM_011537895.1 XP_011536197.1
AF461893.1 AAQ04807.1
AK095717.1
AK097154.1 1 913
AY038999.1 AAK72099.1
AY050629.1 AAK95565.1
BC028394.2 AAH28394.2
BC146803.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1576n100 Chr.12:128763841 - 128795043 on Build GRCh38 Gain SLC15A4
nsv1051433 Chr.12:128679360 - 128888555 on Build GRCh38 Gain TMEM132C LOC101929984 LOC100128276 SLC15A4 GLT1D1
esv3631151 Chr.12:128793327 - 128853915 on Build GRCh38 Gain LOC101929984 LOC100128276 SLC15A4 GLT1D1
esv2759920 Chr.12:128587760 - 128896765 on Build GRCh38 Loss TMEM132C LOC101929984 LOC100128276 SLC15A4 GLT1D1
nsv1040831 Chr.12:128749443 - 129516029 on Build GRCh38 Gain TMEM132D LOC101927735 LOC101929984 LOC100128276 SLC15A4 GLT1D1 LOC283352
nsv560650 Chr.12:128744185 - 128799166 on Build GRCh38 Gain SLC15A4
dgv527e212 Chr.12:128794319 - 128806710 on Build GRCh38 Loss SLC15A4
nsv832549 Chr.12:128739165 - 128936554 on Build GRCh38 Loss LOC101929984 LOC100128276 SLC15A4 GLT1D1
esv3581993 Chr.12:128679608 - 128885566 on Build GRCh38 Gain TMEM132C LOC101929984 LOC100128276 SLC15A4 GLT1D1

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More Information


Additional Information:

For this assay, SNP(s) [rs147786891] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Function(s) Process(es)


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