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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:883236 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01741687_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain SLC25A22 AP2A2 CRACR2B PDDC1 PNPLA2 POLR2L SNORA52 TSPAN4 CHID1 LOC171391 PANO1 CD151 CEND1 PIDD1 RPLP2
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss CHID1 MUC6 AP2A2 LOC101927503
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss SLC25A22 CDHR5 MIR210HG CRACR2B PTDSS2 MUC2 POLR2L TOLLIP-AS1 ANO9 MUC5B TMEM80 CHID1 LOC171391 PANO1 SIGIRR DEAF1 PIDD1 LOC143666 LOC101927503 EPS8L2 RASSF7 SCT RNH1 TALDO1 LRRC56 AP2A2 PDDC1 PNPLA2 DRD4 SNORA52 HRAS TOLLIP MIR6744 LOC101059906 TSPAN4 IRF7 MUC6 PHRF1 CD151 CEND1 MUC5AC RPLP2 LMNTD2 MIR210
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SLC25A22 CDHR5 MIR210HG CRACR2B PTDSS2 POLR2L ANO9 TMEM80 CHID1 LOC171391 PANO1 SIGIRR DEAF1 B4GALNT4 PIDD1 LOC143666 EPS8L2 RASSF7 SCT RNH1 TALDO1 LRRC56 AP2A2 PDDC1 PNPLA2 DRD4 SNORA52 HRAS LOC101059906 TSPAN4 PKP3 IRF7 PHRF1 CD151 CEND1 RPLP2 LMNTD2 MIR210
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion AP2A2 MUC2 TOLLIP-AS1 TOLLIP MUC5B MIR6744 TSPAN4 CHID1 MOB2 MUC6 MUC5AC LOC101927503 BRSK2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion SLC25A22 CDHR5 MIR210HG CRACR2B PTDSS2 POLR2L TMEM80 CHID1 LOC171391 PANO1 DEAF1 PIDD1 LOC143666 EPS8L2 RASSF7 SCT RNH1 TALDO1 LRRC56 PDDC1 PNPLA2 DRD4 SNORA52 HRAS LOC101059906 TSPAN4 IRF7 PHRF1 CD151 CEND1 RPLP2 LMNTD2 MIR210
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss SLC25A22 CDHR5 MIR210HG CRACR2B PTDSS2 MUC2 POLR2L ANO9 MUC5B TMEM80 CHID1 LOC171391 PANO1 SIGIRR DEAF1 B4GALNT4 PIDD1 LOC143666 LOC101927503 EPS8L2 RASSF7 SCT RNH1 TALDO1 LRRC56 AP2A2 PDDC1 PNPLA2 DRD4 SNORA52 HRAS TOLLIP MIR6744 LOC101059906 TSPAN4 PKP3 IRF7 MUC6 PHRF1 CD151 CEND1 MUC5AC RPLP2 LMNTD2 MIR210
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 CHID1 MUC6 AP2A2
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion AP2A2 MUC2 TOLLIP-AS1 TOLLIP MUC5B MIR6744 TSPAN4 CHID1 MOB2 MUC6 MUC5AC LOC101927503 BRSK2
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss TSPAN4 CHID1 AP2A2 CRACR2B PNPLA2 CD151 POLR2L PIDD1 SNORA52 RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss SLC25A22 CRACR2B PDDC1 PNPLA2 POLR2L SNORA52 TSPAN4 CHID1 LOC171391 PANO1 CD151 CEND1 PIDD1 RPLP2
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain TSPAN4 CHID1 CRACR2B PNPLA2 CD151 POLR2L
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion SLC25A22 TALDO1 CRACR2B PDDC1 PNPLA2 POLR2L SNORA52 TSPAN4 CHID1 LOC171391 PANO1 CD151 CEND1 PIDD1 RPLP2

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