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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:883236 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01741687_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss CHID1 AP2A2 LOC101927503 MUC6
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CRACR2B LOC171391 PDDC1 SLC25A22 CHID1 PANO1 CD151 AP2A2 SNORA52 PNPLA2 PIDD1 RPLP2 CEND1 POLR2L TSPAN4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss CRACR2B SLC25A22 PHRF1 MIR6744 LOC143666 CD151 AP2A2 MUC2 TOLLIP PTDSS2 MUC6 CDHR5 MIR210HG ANO9 IRF7 PNPLA2 TALDO1 MIR210 MUC5B RPLP2 CEND1 POLR2L DRD4 LOC171391 TMEM80 PDDC1 CHID1 RASSF7 PANO1 LOC101059906 SIGIRR SNORA52 SCT TOLLIP-AS1 DEAF1 MUC5AC LRRC56 RNH1 EPS8L2 PIDD1 LOC101927503 TSPAN4 LMNTD2 HRAS
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CRACR2B SLC25A22 PHRF1 LOC143666 CD151 AP2A2 PTDSS2 PKP3 CDHR5 MIR210HG ANO9 IRF7 PNPLA2 TALDO1 B4GALNT4 MIR210 RPLP2 CEND1 POLR2L DRD4 LOC171391 TMEM80 PDDC1 CHID1 RASSF7 PANO1 LOC101059906 SIGIRR SNORA52 SCT DEAF1 LRRC56 RNH1 EPS8L2 PIDD1 TSPAN4 LMNTD2 HRAS
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion CHID1 MIR6744 AP2A2 MUC2 TOLLIP MOB2 MUC6 TOLLIP-AS1 MUC5AC BRSK2 MUC5B LOC101927503 TSPAN4
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CRACR2B SLC25A22 PHRF1 LOC143666 CD151 PTDSS2 CDHR5 MIR210HG IRF7 PNPLA2 TALDO1 MIR210 RPLP2 CEND1 POLR2L DRD4 LOC171391 TMEM80 PDDC1 CHID1 RASSF7 PANO1 LOC101059906 SNORA52 SCT DEAF1 LRRC56 RNH1 EPS8L2 PIDD1 TSPAN4 LMNTD2 HRAS
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss CRACR2B SLC25A22 PHRF1 MIR6744 LOC143666 CD151 AP2A2 MUC2 TOLLIP PTDSS2 PKP3 MUC6 CDHR5 MIR210HG ANO9 IRF7 PNPLA2 TALDO1 B4GALNT4 MIR210 MUC5B RPLP2 CEND1 POLR2L DRD4 LOC171391 TMEM80 PDDC1 CHID1 RASSF7 PANO1 LOC101059906 SIGIRR SNORA52 SCT DEAF1 MUC5AC LRRC56 RNH1 EPS8L2 PIDD1 LOC101927503 TSPAN4 LMNTD2 HRAS
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain CHID1 AP2A2 TSPAN4 MUC6
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion CHID1 MIR6744 AP2A2 MUC2 TOLLIP MOB2 MUC6 TOLLIP-AS1 MUC5AC BRSK2 MUC5B LOC101927503 TSPAN4
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss CRACR2B CHID1 PNPLA2 PIDD1 CD151 AP2A2 RPLP2 SNORA52 POLR2L TSPAN4
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CRACR2B LOC171391 PDDC1 SLC25A22 CHID1 PANO1 CD151 SNORA52 PNPLA2 PIDD1 RPLP2 CEND1 POLR2L TSPAN4
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CRACR2B CHID1 PNPLA2 CD151 POLR2L TSPAN4
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CRACR2B LOC171391 PDDC1 SLC25A22 CHID1 PANO1 CD151 SNORA52 PNPLA2 TALDO1 PIDD1 RPLP2 CEND1 POLR2L TSPAN4

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