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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:408095 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01743209_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss B4GALNT4 ANO9 HRAS RASSF7 MIR210HG LMNTD2 IRF7 LOC101059906 PKP3 PGGHG LRRC56 LOC143666 MIR210 CDHR5 IFITM2 RNH1 IFITM1 IFITM5 PTDSS2 IFITM3 PHRF1 SIGIRR
nsv467633 Chr.11:366710 - 432436 on Build GRCh38 Loss B4GALNT4 ANO9 PKP3 SIGIRR
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TMEM80 B4GALNT4 MUC5AC PIDD1 PANO1 DRD4 RASSF7 TOLLIP AP2A2 LOC171391 SLC25A22 MUC5B LOC143666 MUC6 CEND1 MIR210 DEAF1 CD151 MIR6744 SNORA52 CRACR2B ANO9 CHID1 HRAS TALDO1 MIR210HG LMNTD2 PNPLA2 IRF7 MUC2 LOC101059906 PKP3 LRRC56 TSPAN4 CDHR5 PDDC1 LOC101927503 SCT RNH1 EPS8L2 PTDSS2 RPLP2 PHRF1 POLR2L SIGIRR
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain B4GALNT4 ANO9 PKP3 SIGIRR
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion B4GALNT4 ANO9 RNH1 PTDSS2 PKP3 SIGIRR
dgv1012n100 Chr.11:198510 - 427836 on Build GRCh38 Gain B4GALNT4 PSMD13 ANO9 BET1L MIR6743 PKP3 PGGHG NLRP6 SIRT3 RIC8A IFITM2 IFITM1 ODF3 IFITM5 IFITM3 SIGIRR
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion B4GALNT4 ANO9 PTDSS2 PKP3 SIGIRR
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TMEM80 B4GALNT4 PIDD1 PANO1 DRD4 RASSF7 AP2A2 LOC171391 SLC25A22 LOC143666 CEND1 MIR210 DEAF1 CD151 SNORA52 CRACR2B ANO9 CHID1 HRAS TALDO1 MIR210HG LMNTD2 PNPLA2 IRF7 LOC101059906 PKP3 LRRC56 TSPAN4 CDHR5 PDDC1 SCT RNH1 EPS8L2 PTDSS2 RPLP2 PHRF1 POLR2L SIGIRR
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss PKP3 SIGIRR

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