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See other LOC100289580 CNV Assays ›
Gene Symbol
LOC100289580
Assay Reference Genome
Location

Chr.16:88733374 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01749141_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100289580

Gene Name:

 uncharacterized LOC100289580

Gene Aliases:

 -

Location:

 Chr.16:88731180-88741425 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100289580 NR_103774.1
AK294743.1

Target Gene Details

Entrez Gene ID:

 9780

Gene Name:

 piezo type mechanosensitive ion channel component 1

Gene Aliases:

 DHS, FAM38A, LMPH3, Mib

Location:

 Chr.16:88715338-88785220 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIEZO1 NM_001142864.3 19 2824 NP_001136336.2
AB161230.1 8 1275 BAF03565.1
BC150271.1 8 1112
D87071.1 8 1112 BAA13240.1
KC602455.1 19 2568

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC339059 PIEZO1 LOC107987238 CBFA2T3 CDH15 ZNF778 SLC22A31 ACSF3 LOC101927793 TRAPPC2L LINC00304 LOC100129697 LOC100289580 MIR4722 CTU2 LOC105371409 CDT1 APRT GALNS LOC400558 PABPN1L
nsv471113 Chr.16:88650665 - 88764428 on Build GRCh38 Loss LOC339059 PIEZO1 CYBA SNAI3 RNF166 LOC100289580 MIR4722 MVD CTU2 SNAI3-AS1
nsv471114 Chr.16:88688461 - 88756339 on Build GRCh38 Gain LOC339059 PIEZO1 RNF166 LOC100289580 MIR4722 CTU2
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain LOC339059 CDT1 PIEZO1 LOC107987238 APRT SNAI3 GALNS RNF166 LOC100289580 MIR4722 CTU2 SNAI3-AS1
nsv517643 Chr.16:88713767 - 88756339 on Build GRCh38 Loss LOC339059 PIEZO1 LOC100289580 MIR4722 CTU2
nsv833327 Chr.16:88667431 - 88757621 on Build GRCh38 Loss LOC339059 PIEZO1 SNAI3 RNF166 LOC100289580 MIR4722 CTU2 SNAI3-AS1
nsv573673 Chr.16:88721265 - 88735362 on Build GRCh38 Loss PIEZO1 LOC100289580
nsv952070 Chr.16:88257295 - 88780192 on Build GRCh38 Deletion IL17C LOC339059 PIEZO1 SNAI3 LOC100289580 LOC107984862 MIR4722 CTU2 SNAI3-AS1 CYBA ZNF469 RNF166 ZC3H18-AS1 ZFPM1 MIR5189 ZC3H18 MVD
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss PIEZO1 CBFA2T3 ZNF778 MIR4722 ANKRD11 CDT1 LOC100287036 CHMP1A SPATA2L GALNS MVD CENPBD1 ACSF3 GAS8 SPG7 VPS9D1-AS1 LOC101927793 TRAPPC2L CTU2 DEF8 RNF166 DPEP1 URAHP LOC101927817 AFG3L1P DBNDD1 CPNE7 GAS8-AS1 VPS9D1 SLC22A31 LOC105371414 PRDM7 SPATA33 LINC00304 LOC100129697 SPIRE2 SNAI3-AS1 MC1R LOC400558 PABPN1L FANCA TCF25 IL17C LOC339059 LOC107987238 CDH15 SNAI3 TUBB3 TUBB8P7 RPL13 LOC100289580 FAM157C LOC105371419 LOC105371409 CDK10 CYBA APRT LOC107984817 ZNF276 SNORD68
nsv1160442 Chr.16:88708161 - 88778524 on Build GRCh38 Deletion LOC339059 PIEZO1 LOC100289580 MIR4722 CTU2
nsv1927 Chr.16:88712585 - 88743583 on Build GRCh38 Insertion LOC339059 PIEZO1 LOC100289580 MIR4722 CTU2
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC339059 PIEZO1 LOC107987238 CBFA2T3 LOC101927793 TRAPPC2L LOC100129697 LOC100289580 MIR4722 CTU2 LOC105371409 CDT1 APRT GALNS PABPN1L

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