Hs01765669_cn

• Gene Symbol: C1QTNF1
• Assay Reference Genome Location: Chr.17:79024357 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 114897
• Gene Name: C1q and tumor necrosis factor related protein 1
• Gene Aliases: CTRP1, GIP, ZSIG37
• Location: Chr.17:79022934-79049788 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C1QTNF1	NM_030968.3	1	282	NP_112230.1
	NM_153372.1			NP_699203.1
	NM_198594.2	1	282	NP_940996.1
	XM_006721664.1	1	234	XP_006721727.1
	XM_006721666.1	1	234	XP_006721729.1
	AK055541.1	1	97	BAB70947.1
	AY358424.1	1	248	AAQ88790.1
	CD250839.1
	DA877694.1
	DA910618.1	1	282

Target Gene Details

• Entrez Gene ID: 100507410
• Gene Name: C1QTNF1 antisense RNA 1
• Gene Aliases: -
• Location: Chr.17:79019209-79027655 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C1QTNF1-AS1	NR_040018.1
	NR_040019.1
	DA938488.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470610	Chr.17:78973800 - 79091723 on Build GRCh38	Loss	C1QTNF1-AS1 ENGASE CANT1 LGALS3BP C1QTNF1 RBFOX3
nsv523650	Chr.17:78933797 - 79165563 on Build GRCh38	Loss	C1QTNF1-AS1 ENGASE CANT1 LGALS3BP C1QTNF1 RBFOX3
nsv1057193	Chr.17:78921031 - 79481744 on Build GRCh38	Gain	C1QTNF1-AS1 TIMP2 ENGASE CANT1 LGALS3BP C1QTNF1 RBFOX3

More Information

Additional Information:

For this assay, SNP(s) [rs150083322] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of cytosolic calcium ion concentration
negative regulation of platelet activation
positive regulation of gene expression
regulation of glucose metabolic process
positive regulation of MAPK cascade
protein homooligomerization
positive regulation of protein kinase B signaling
protein heterotrimerization
negative regulation of platelet aggregation
positive regulation of aldosterone secretion

Function(s)

protein binding
collagen binding