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See other TRAF7 CNV Assays ›
Gene Symbol
TRAF7
Assay Reference Genome
Location

Chr.16:2171299 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01785434_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84231

Gene Name:

 TNF receptor associated factor 7

Gene Aliases:

 RFWD1, RNF119

Location:

 Chr.16:2155752-2178129 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRAF7 NM_032271.2 NP_115647.2
XM_005255627.4 XP_005255684.1
XM_011522700.1 XP_011521002.1
AK090624.1
AL136921.1 CAB66855.1
AY569455.1 AAS68363.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CASKIN1 IGFALS FAM234A WFIKKN1 WDR90 TPSAB1 E4F1 MIR3677 MIR4717 MIR3178 PRR35 LOC105371038 LUC7L EME2 LOC107984876 CLCN7 SSTR5-AS1 MRPL28 PGP NARFL SNHG9 CCNF LOC100287175 LINC00254 ABCA17P DECR2 SNORA78 MIR1225 MIR6859-4 SOX8 ECI1 BAIAP3 NTN3 MRPS34 RAB11FIP3 NTHL1 ABCA3 MIR6768 BRICD5 TSR3 PRSS29P SPSB3 LMF1 LOC100134368 TMEM204 CEMP1 SNORD60 GNPTG SLC9A3R2 LINC00235 PRR25 JMJD8 TPSB2 POLR3K NOXO1 DDX11L10 PIGQ TPSD1 PDPK1 LMF1-AS1 TELO2 LOC105371046 HBA2 NUBP2 ARHGDIG MIR3176 MIR3177 NPRL3 LOC105371045 MPG RNPS1 AXIN1 TBL3 CCDC154 ATP6V0C MSLN METRN TSC2 UNKL HAGHL METTL26 LOC106660606 HS3ST6 AMDHD2 FLJ42627 CACNA1H SYNGR3 HBZ RPL3L RAB26 CCDC78 RHBDF1 RNF151 RPL23AP5 MIR5587 HAGH RHOT2 HN1L FBXL16 LOC107987233 CAPN15 ZNF598 PTX4 SSTR5 FAM173A CHTF18 RAB40C PKD1 GNG13 ERVK13-1 RPUSD1 IFT140 RPS2 FAHD1 LOC105371049 SNORA10 MCRIP2 NHLRC4 NME3 LOC105371184 HBM TPSG1 MLST8 LOC652276 C1QTNF8 MIR3180-5 C16orf91 WASIR2 MIR6767 RHBDL1 WDR24 TMEM8A SNORA64 HBQ1 STUB1 MEIOB DNASE1L2 TRAF7 MIR6511B1 TBC1D24 MAPK8IP3 SNHG19 MIR4516 KCTD5 NPW NDUFB10 PDIA2 MIR662 MSRB1 CRAMP1 GFER C16orf59 LOC729652 LOC101929280 MIR940 NME4 LOC105371047 PRSS27 SNRNP25 RGS11 UBE2I HBA1
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss CASKIN1 PKD1 MIR1225 LOC105371049 ECI1 RNPS1 TBL3 NTHL1 TSC2 BRICD5 MLST8 MIR3180-5 E4F1 DNASE1L2 SNORD60 SLC9A3R2 TRAF7 MIR6511B1 SYNGR3 SNHG19 MIR4516 RAB26 NPW NOXO1 GFER PGP ZNF598
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss DNASE1L2 CASKIN1 PKD1 SNORD60 TRAF7 MIR6511B1 MIR1225 LOC105371049 ECI1 SNHG19 MIR4516 RAB26 TSC2 BRICD5 MLST8 MIR3180-5 E4F1 PGP
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss DNASE1L2 CASKIN1 SNORD60 TRAF7 ECI1 RNPS1 SNHG19 RAB26 BRICD5 MLST8 E4F1 MIR940 PGP MIR3677 LOC106660606
nsv571190 Chr.16:2055054 - 2200730 on Build GRCh38 Loss CASKIN1 PKD1 TSC2 SNORD60 TRAF7 MIR3180-5 MIR6511B1 MIR1225 LOC105371049 SNHG19 MIR4516 RAB26
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain CASKIN1 PKD1 ABCA17P MIR1225 LOC105371049 ECI1 RNPS1 NTN3 ATP6V0C ABCA3 MIR6768 TSC2 BRICD5 MLST8 LOC652276 MIR3180-5 E4F1 MIR6767 MIR3677 MIR4717 LOC106660606 MIR3178 AMDHD2 CEMP1 DNASE1L2 SNORD60 TRAF7 MIR6511B1 TBC1D24 SNHG19 MIR4516 RAB26 PDPK1 C16orf59 LOC729652 MIR940 PGP CCNF
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss DNASE1L2 CASKIN1 BRICD5 MLST8 TRAF7 E4F1 MIR940 PGP MIR3677 ECI1 RNPS1 LOC106660606
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion DNASE1L2 CASKIN1 SNORD60 TRAF7 ECI1 RNPS1 SNHG19 RAB26 ABCA3 BRICD5 MLST8 E4F1 MIR940 PGP MIR3677 MIR4717 LOC106660606

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