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See other PPT2 CNV Assays ›
Gene Symbol
PPT2
Assay Reference Genome
Location

Chr.6:32162812 on build GRCh38
Cytoband
6p21.32
Assay ID Hs01790100_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9374

Gene Name:

 palmitoyl-protein thioesterase 2

Gene Aliases:

 C6orf8, G14, PPT-2

Location:

 Chr.6:32153452-32163681 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2 NM_001204103.1 NP_001191032.1
NM_005155.6 NP_005146.4
NM_138717.2 NP_619731.2
AF020543.1 AAB80730.1
AL110128.1 CAB53659.1
BC001355.2 AAH01355.1
CR533546.1 CAG38577.1
Y17958.1 CAB46981.1

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1
AB209572.1 BAD92809.1
AF020544.1 AAB80731.1
AK290473.1
AK296648.1
AK307427.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss MIR6721 GPSM3 PBX2 ATF6B AGER MIR6833 RNF5 EGFL8 NOTCH4 TNXB PPT2-EGFL8 LOC100507547 AGPAT1 FKBPL PPT2 PRRT1
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss MIR6721 HCG23 CYP21A2 C4B C4A HLA-DRB1 GPSM3 TNXA C6orf10 HLA-DRB6 MIR6833 MIR3135B EGFL8 NOTCH4 TNXB HLA-DQB1 HLA-DQB1-AS1 LOC101929163 HLA-DQB2 AGPAT1 HLA-DQA1 FKBPL PRRT1 PBX2 ATF6B AGER RNF5 HLA-DRA PPT2-EGFL8 BTNL2 HLA-DRB5 LOC100507547 CYP21A1P PPT2 HLA-DQA2
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss MIR6721 SNORD48 HCG23 C4B C4A C6orf10 MIR6833 HLA-DQB1 HLA-DQB1-AS1 PRRT1 ZBTB12 SLC44A4 ATF6B HSPA1B RNF5 CFB PPT2-EGFL8 C2-AS1 HLA-DRB5 DXO STK19 CYP21A2 MIR1236 HLA-DRB1 GPSM3 TNXA HLA-DRB6 SNORD52 EGFL8 NOTCH4 TNXB NEU1 LOC101929163 AGPAT1 HLA-DQA1 FKBPL C6orf48 SKIV2L PBX2 EHMT2 AGER HLA-DRA HSPA1A BTNL2 NELFE LOC100507547 C2 CYP21A1P PPT2
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss MIR6721 CYP21A2 C4B C4A MIR1236 GPSM3 TNXA MIR6833 EGFL8 NOTCH4 TNXB AGPAT1 FKBPL PRRT1 SKIV2L PBX2 ATF6B AGER RNF5 CFB PPT2-EGFL8 C2-AS1 NELFE LOC100507547 DXO C2 STK19 CYP21A1P PPT2
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion MIR6721 SNORD48 HCG23 C4B C4A C6orf10 NFKBIL1 SAPCD1-AS1 LY6G6E BAG6 MIR6833 MSH5 VWA7 HCG26 TNF PRRT1 C6orf47 ATP6V1G2-DDX39B ZBTB12 SAPCD1 LY6G5C SLC44A4 LTA ATF6B HSPA1B RNF5 PRRC2A CLIC1 CFB ABHD16A PPT2-EGFL8 LY6G6D MICB C2-AS1 HLA-DRB5 MIR6832 DDAH2 DXO LST1 STK19 HSPA1L HCP5 MIR4646 MCCD1 SNORD117 ATP6V1G2 CYP21A2 APOM MIR1236 C6orf25 HLA-DRB1 GPSM3 TNXA HLA-DRB6 LSM2 SNORD52 EGFL8 NOTCH4 LOC100287329 TNXB LTB AIF1 NEU1 LOC101929163 AGPAT1 DDX39B FKBPL GPANK1 DDX39B-AS1 C6orf48 SKIV2L LY6G5B VARS LY6G6C PBX2 EHMT2 AGER SNORA38 LOC102725068 MSH5-SAPCD1 HLA-DRA HSPA1A BTNL2 NELFE LOC100507547 C2 SNORD84 LY6G6F CYP21A1P CSNK2B PPT2 NCR3
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion MIR6721 SNORD48 VPS52 C4B SAPCD1-AS1 BAG6 MIR6833 MSH5 HCG26 RPS18 PSMB9 TNF COL11A2 WDR46 ATP6V1G2-DDX39B HLA-DOA CUTA SAPCD1 LY6G5C SLC44A4 ATF6B HSPA1B PRRC2A ABHD16A B3GALT4 MIR6832 DDAH2 DXO STK19 PHF1 HLA-DQA2 SYNGAP1 MIR5004 ATP6V1G2 CYP21A2 MIR1236 RXRB HLA-DRB1 SLC39A7 LSM2 SNORD52 MIR3135B NOTCH4 LOC100287329 TNXB PSMB8-AS1 BRD2 LOC101929163 FKBPL C6orf48 SKIV2L MIR219A1 LY6G5B LY6G6C PSMB8 AGER RING1 SNORA38 MSH5-SAPCD1 HSD17B8 BTNL2 LOC100507547 MIR6873 C2 HLA-DMA HCG23 C4A MIR6834 TAP2 C6orf10 NFKBIL1 LY6G6E VWA7 HLA-DQB1 PFDN6 KIFC1 HLA-DQB1-AS1 PRRT1 C6orf47 ZBTB12 DAXX LTA RNF5 LOC100294145 CLIC1 CFB HLA-DPA1 PPT2-EGFL8 LY6G6D MICB C2-AS1 HLA-DRB5 LST1 HSPA1L HCP5 MIR4646 HCG24 MCCD1 SNORD117 HCG25 APOM RGL2 C6orf25 GPSM3 TNXA HLA-DRB6 TAPBP EGFL8 HLA-DOB LTB AIF1 NEU1 HLA-DPB2 HLA-DQB2 AGPAT1 DDX39B HLA-DQA1 GPANK1 DDX39B-AS1 VARS PPP1R2P1 ZBTB22 PBX2 EHMT2 ZBTB9 LOC102725068 HLA-DRA HLA-DPB1 HSPA1A NELFE TAP1 HLA-DMB SNORD84 LY6G6F CYP21A1P CSNK2B PPT2 NCR3
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss MIR6721 GPSM3 PBX2 ATF6B AGER MIR6833 RNF5 EGFL8 NOTCH4 TNXB PPT2-EGFL8 LOC100507547 AGPAT1 FKBPL PPT2 PRRT1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion MIR6721 SNORD48 VPS52 C4B SAPCD1-AS1 BAG6 MIR6833 MSH5 HCG26 RPS18 PSMB9 TNF COL11A2 WDR46 ATP6V1G2-DDX39B HLA-DOA CUTA SAPCD1 LY6G5C SLC44A4 ATF6B HSPA1B PRRC2A ABHD16A B3GALT4 MIR6832 DDAH2 DXO STK19 PHF1 HLA-DQA2 SYNGAP1 MIR5004 ATP6V1G2 CYP21A2 MIR1236 RXRB HLA-DRB1 SLC39A7 LSM2 SNORD52 MIR3135B NOTCH4 LOC100287329 TNXB PSMB8-AS1 BRD2 LOC101929163 FKBPL C6orf48 SKIV2L MIR219A1 LY6G5B LY6G6C PSMB8 AGER RING1 SNORA38 MSH5-SAPCD1 HSD17B8 BTNL2 LOC100507547 MIR6873 C2 HLA-DMA HCG23 C4A MIR6834 TAP2 C6orf10 NFKBIL1 LY6G6E VWA7 HLA-DQB1 PFDN6 KIFC1 HLA-DQB1-AS1 PRRT1 C6orf47 ZBTB12 DAXX LTA RNF5 LOC100294145 CLIC1 CFB HLA-DPA1 PPT2-EGFL8 LY6G6D MICB C2-AS1 HLA-DRB5 LST1 HSPA1L HCP5 MIR4646 HCG24 MCCD1 SNORD117 HCG25 APOM RGL2 C6orf25 GPSM3 TNXA HLA-DRB6 TAPBP EGFL8 HLA-DOB LTB AIF1 NEU1 HLA-DPB2 HLA-DQB2 AGPAT1 DDX39B HLA-DQA1 GPANK1 DDX39B-AS1 VARS PPP1R2P1 ZBTB22 PBX2 EHMT2 ZBTB9 LOC102725068 HLA-DRA HLA-DPB1 HSPA1A NELFE TAP1 HLA-DMB SNORD84 LY6G6F CYP21A1P CSNK2B PPT2 NCR3
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss MIR6721 SNORD48 MIR6891 HCG23 C4B C4A C6orf10 NFKBIL1 SAPCD1-AS1 LY6G6E BAG6 MIR6833 MSH5 VWA7 HCG26 TNF PRRT1 C6orf47 ATP6V1G2-DDX39B ZBTB12 SAPCD1 LY6G5C SLC44A4 LTA ATF6B HSPA1B RNF5 PRRC2A CLIC1 CFB ABHD16A PPT2-EGFL8 LY6G6D MICB C2-AS1 MIR6832 DDAH2 DXO LST1 STK19 HSPA1L HCP5 MIR4646 MCCD1 SNORD117 ATP6V1G2 CYP21A2 APOM MIR1236 C6orf25 GPSM3 TNXA LSM2 SNORD52 MICA EGFL8 NOTCH4 LOC100287329 TNXB LTB AIF1 NEU1 LOC101929163 AGPAT1 DDX39B FKBPL GPANK1 DDX39B-AS1 C6orf48 SKIV2L LY6G5B VARS LY6G6C PBX2 EHMT2 AGER SNORA38 LOC102725068 MSH5-SAPCD1 HLA-DRA HSPA1A BTNL2 NELFE LOC100507547 C2 SNORD84 LY6G6F CYP21A1P CSNK2B PPT2 HLA-B NCR3

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