Hs01796859_cn

• Gene Symbol: PIGT
• Assay Reference Genome Location: Chr.20:45416672 on build GRCh38
• Cytoband: 20q13.12

Target Gene Details

• Entrez Gene ID: 51604
• Gene Name: phosphatidylinositol glycan anchor biosynthesis class T
• Gene Aliases: CGI-06, MCAHS3, NDAP, PNH2
• Location: Chr.20:45416067-45426245 on Build GRCh38
• Assay Gene Location: Overlaps Exon 2 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PIGT	NM_001184728.2			NP_001171657.1
	NM_001184729.2			NP_001171658.1
	NM_001184730.2			NP_001171659.1
	NM_015937.5			NP_057021.2
	NR_047691.1
	NR_047692.1
	NR_047693.1
	NR_047694.1
	NR_047695.1
	XM_005260430.2			XP_005260487.1
	XM_005260432.2			XP_005260489.1
	AB057724.1			BAB60854.1
	AF058295.1
	AF132940.1			AAD27715.1
	AK075469.1			BAC11639.1
	AK225517.1
	AK293294.1
	AK293686.1
	AK296063.1
	AK296139.1
	AK299013.1
	AK301815.1
	AK302093.1
	AK311100.1
	AK311416.1
	AK311492.1
	AK311520.1
	AK311522.1
	AK316358.1
	AL121742.1			CAB57341.1
	AY358588.1			AAQ88951.1
	BC015022.1
	BC110892.1			AAI10893.1
	BC136827.1
	BC136828.1
	BX537612.1	1	530	CAD97799.1
	DA037291.1
	DC384944.1
	DC399420.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1056102	Chr.20:44673341 - 45636248 on Build GRCh38	Loss	WFDC12 SPINT3 TOMM34 TP53TG5 WFDC5 DBNDD2 WFDC9 RBPJL SYS1-DBNDD2 EPPIN-WFDC6 YWHAB WFDC6 PABPC1L MIR6812 WFDC10A PI3 KCNK15 EPPIN PIGT SYS1 SLPI KCNS1 WFDC2 SDC4 STK4 SEMG1 RIMS4 WFDC8 SEMG2 WISP2 KCNK15-AS1 STK4-AS1 MATN4
dgv4319n100	Chr.20:45384898 - 45428463 on Build GRCh38	Gain	PIGT DBNDD2 SYS1-DBNDD2 MIR6812

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

attachment of GPI anchor to protein
neuron differentiation
neuron apoptotic process

Function(s)

GPI-anchor transamidase activity
protein binding