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See other KLF16 CNV Assays ›
Gene Symbol
KLF16
Assay Reference Genome
Location

Chr.19:1854730 on build GRCh38
Cytoband
19p13.3
Assay ID Hs01797818_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 83855

Gene Name:

 Kruppel like factor 16

Gene Aliases:

 BTEB4, DRRF, NSLP2

Location:

 Chr.19:1852399-1863565 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KLF16 NM_031918.3 NP_114124.1
AF327440.1 AAK15698.1
CV809534.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3893156 Chr.19:1766738 - 2115791 on Build GRCh38 Loss CSNK1G2-AS1 MIR1909 LOC100288123 REXO1 ATP8B3 SCAMP4 ADAT3 AP3D1 ONECUT3 BTBD2 CSNK1G2 IZUMO4 KLF16 MKNK2 ABHD17A MOB3A
esv2669985 Chr.19:1852046 - 1864993 on Build GRCh38 Deletion KLF16
esv32942 Chr.19:1320268 - 1999205 on Build GRCh38 Gain+Loss RPS15 ADAMTSL5 MIR1909 C19orf25 APC2 REXO1 SCAMP4 ADAT3 UQCR11 BTBD2 PCSK4 CSNK1G2 KLF16 ABHD17A NDUFS7 GAMT CSNK1G2-AS1 LOC100288123 DAZAP1 ATP8B3 MEX3D MUM1 MBD3 ONECUT3 TCF3 PLK5 REEP6
nsv470107 Chr.19:1782799 - 2100347 on Build GRCh38 Loss CSNK1G2-AS1 MIR1909 LOC100288123 REXO1 ATP8B3 SCAMP4 ADAT3 BTBD2 CSNK1G2 IZUMO4 KLF16 MKNK2 ABHD17A MOB3A
nsv1160560 Chr.19:1791100 - 1916393 on Build GRCh38 Deletion MIR1909 LOC100288123 KLF16 REXO1 ATP8B3 SCAMP4 ADAT3 ABHD17A
nsv578338 Chr.19:1847699 - 1869095 on Build GRCh38 Loss KLF16 REXO1
nsv578337 Chr.19:1808864 - 1904613 on Build GRCh38 Gain MIR1909 LOC100288123 KLF16 REXO1 ATP8B3 ABHD17A
nsv953942 Chr.19:1371602 - 2057401 on Build GRCh38 Deletion RPS15 ADAMTSL5 MIR1909 C19orf25 APC2 REXO1 SCAMP4 ADAT3 UQCR11 BTBD2 PCSK4 CSNK1G2 KLF16 ABHD17A NDUFS7 GAMT CSNK1G2-AS1 LOC100288123 DAZAP1 ATP8B3 MEX3D MUM1 MBD3 ONECUT3 TCF3 PLK5 REEP6 MKNK2
esv2660894 Chr.19:1854446 - 1872693 on Build GRCh38 Deletion KLF16

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More Information


Additional Information:

For this assay, SNP(s) [rs76157530] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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