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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:971335 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01803198_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain ISG15 LOC100130417 NOC2L LOC284600 RNF223 PLEKHN1 C1orf159 HES4 SAMD11 KLHL17 AGRN PERM1 LOC107985728 LOC100288175 LOC105378948
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100132287 B3GALT6 ANKRD65 ACAP3 UBE2J2 C1orf159 PERM1 LOC101928626 FAAP20 ISG15 NOC2L TTLL10 DDX11L1 LOC284600 GNB1 ATAD3C MIR6859-2 TTLL10-AS1 FAM138A LOC100133331 SLC35E2 ATAD3B LOC100288175 MIR6723 MTND1P23 MMP23B RNF223 PLEKHN1 AGRN MRPL20 MORN1 LOC100134822 LOC102724312 SLC35E2B LOC107985729 LOC105378592 OR4F29 LINC01342 LOC148413 PUSL1 TNFRSF18 ATAD3A LOC100506504 MIR6727 AURKAIP1 FAM132A LOC100288069 MMP23A NADK MIR6859-1 TMEM88B SSU72 FAM41C MXRA8 TMEM52 TMEM240 SAMD11 CDK11B PRKCZ LINC01128 TAS1R3 LOC105378948 LOC100130417 CPTP LOC107984841 CDK11A GABRD MIR429 LOC105378949 DVL1 LOC105378947 MIB2 TNFRSF4 LOC729737 FAM87B MIR200A CFAP74 WASH7P HES4 KLHL17 MIR200B CALML6 LOC100129534 MIR6726 LOC107985728 LOC100287934 OR4F16 FNDC10 SCNN1D SDF4 LOC105378591 CPSF3L OR4F5 MIR1302-2 MTND2P28 SKI CCNL2 VWA1 LOC105378589 LINC00115 LOC102725121 MIR6808
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion ISG15 LOC100130417 NOC2L LOC284600 RNF223 PLEKHN1 C1orf159 HES4 SAMD11 KLHL17 AGRN PERM1 LOC107985728 LOC100288175 LOC105378948
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC100130417 NOC2L SAMD11 KLHL17 LOC284600 PERM1 PLEKHN1 LOC107985728
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain TNFRSF4 MIR200A RNF223 PLEKHN1 FAM41C C1orf159 HES4 SAMD11 KLHL17 AGRN MIR200B PERM1 LOC107985728 LOC105378948 ISG15 LOC100130417 NOC2L TTLL10 SDF4 LOC284600 MIR429 LINC01342 TTLL10-AS1 TNFRSF18 LOC100288175
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain FAM87B LOC100288069 RNF223 PLEKHN1 FAM41C C1orf159 HES4 SAMD11 KLHL17 LINC01128 AGRN PERM1 LOC107985728 LOC100287934 LOC101928626 LOC105378948 ISG15 LOC100130417 NOC2L LOC107984841 OR4F16 LOC284600 MTND2P28 LOC105378947 LINC00115 LOC100133331 LOC100288175 MIR6723 MTND1P23
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss AURKAIP1 FAM132A LOC100288069 MMP23A NADK B3GALT6 TMEM88B ANKRD65 SSU72 FAM41C MXRA8 ACAP3 UBE2J2 C1orf159 TMEM240 SAMD11 CDK11B LINC01128 PERM1 TAS1R3 LOC105378948 ISG15 LOC100130417 NOC2L CPTP TTLL10 CDK11A LOC284600 MIR429 ATAD3C DVL1 TTLL10-AS1 SLC35E2 ATAD3B LOC100288175 MIB2 MMP23B TNFRSF4 FAM87B MIR200A RNF223 PLEKHN1 HES4 KLHL17 AGRN MIR200B MRPL20 MIR6726 LOC102724312 LOC107985728 SLC35E2B LOC100287934 FNDC10 SCNN1D SDF4 LOC107985729 CPSF3L LINC01342 LOC148413 PUSL1 TNFRSF18 ATAD3A CCNL2 VWA1 MIR6727 LINC00115 MIR6808
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss TNFRSF4 FAM87B FAM132A MIR200A B3GALT6 RNF223 PLEKHN1 FAM41C UBE2J2 C1orf159 HES4 SAMD11 KLHL17 LINC01128 AGRN MIR200B PERM1 LOC107985728 LOC105378948 ISG15 LOC100130417 NOC2L TTLL10 SDF4 LOC284600 MIR429 LINC01342 TTLL10-AS1 TNFRSF18 LINC00115 LOC100288175
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain ISG15 NOC2L RNF223 PLEKHN1 LINC01342 C1orf159 HES4 SAMD11 KLHL17 AGRN PERM1 LOC100288175 LOC105378948
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AURKAIP1 TNFRSF4 FAM132A MIR200A B3GALT6 TMEM88B RNF223 PLEKHN1 ANKRD65 MXRA8 ACAP3 UBE2J2 C1orf159 HES4 SAMD11 KLHL17 AGRN MIR200B MRPL20 PERM1 MIR6726 LOC107985728 TAS1R3 LOC105378948 ISG15 LOC100130417 NOC2L CPTP TTLL10 SCNN1D SDF4 CPSF3L LOC284600 MIR429 LINC01342 DVL1 LOC148413 TTLL10-AS1 PUSL1 TNFRSF18 CCNL2 MIR6727 LOC100288175 MIR6808
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss ISG15 LOC100130417 NOC2L HES4 SAMD11 KLHL17 AGRN LOC284600 PERM1 PLEKHN1 LOC107985728
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion ISG15 NOC2L TNFRSF4 TTLL10 SDF4 MIR200A MIR429 RNF223 PLEKHN1 LINC01342 C1orf159 HES4 TTLL10-AS1 SAMD11 KLHL17 TNFRSF18 AGRN MIR200B PERM1 LOC100288175 LOC105378948
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC100130417 NOC2L HES4 SAMD11 KLHL17 LINC01128 LOC284600 PERM1 PLEKHN1 LOC107985728 FAM41C

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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