Hs01815552_cn

• Gene Symbol: PIGT
• Assay Reference Genome Location: Chr.20:45425635 on build GRCh38
• Cytoband: 20q13.12

Target Gene Details

• Entrez Gene ID: 51604
• Gene Name: phosphatidylinositol glycan anchor biosynthesis class T
• Gene Aliases: CGI-06, MCAHS3, NDAP, PNH2
• Location: Chr.20:45416067-45426245 on Build GRCh38
• Assay Gene Location: Within Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PIGT	NM_001184728.2	11	1468	NP_001171657.1
	NM_001184729.2	11	1435	NP_001171658.1
	NM_001184730.2	10	1330	NP_001171659.1
	NM_015937.5	12	1636	NP_057021.2
	NR_047691.1	12	1596
	NR_047692.1	11	1539
	NR_047693.1	11	1535
	NR_047694.1	11	1458
	NR_047695.1	9	1229
	XM_005260430.2	9	1107	XP_005260487.1
	XM_005260432.2	11	1430	XP_005260489.1
	AB057724.1	12	1546	BAB60854.1
	AF132940.1	12	1540	AAD27715.1
	AK075469.1	12	1560	BAC11639.1
	AK225517.1	11	1365
	AK293294.1	11	1459
	AK293686.1	11	1381
	AK296063.1	11	1465
	AK296139.1	11	1391
	AK297830.1	7	1115
	AK299013.1	9	1155
	AK302093.1	10	1288
	AK316358.1	12	1522
	AL121742.1	12	1539	CAB57341.1
	AY358588.1	12	1543	AAQ88951.1
	BC015022.1	12	1565
	BC110892.1	12	1544	AAI10893.1
	BC136827.1	12	1574
	BC136828.1	12	1574
	BX537612.1	9	2773	CAD97799.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1056102	Chr.20:44673341 - 45636248 on Build GRCh38	Loss	YWHAB WFDC2 PIGT SYS1-DBNDD2 RBPJL EPPIN-WFDC6 WFDC5 SEMG1 KCNK15 TOMM34 STK4 SEMG2 MATN4 MIR6812 SDC4 DBNDD2 KCNK15-AS1 SPINT3 WFDC9 WISP2 PABPC1L WFDC6 SLPI SYS1 EPPIN PI3 WFDC12 WFDC10A KCNS1 RIMS4 WFDC8 TP53TG5 STK4-AS1
dgv4319n100	Chr.20:45384898 - 45428463 on Build GRCh38	Gain	PIGT SYS1-DBNDD2 MIR6812 DBNDD2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

attachment of GPI anchor to protein
neuron differentiation
neuron apoptotic process

Function(s)

GPI-anchor transamidase activity
protein binding