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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1298583 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01829104_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3 UBE2J2
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3 FAM132A UBE2J2 SDF4 B3GALT6
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss CPSF3L LINC01342 CPTP TNFRSF18 WASH7P CALML6 OR4F5 DDX11L1 NADK SKI LOC102725121 MMP23B MORN1 FAM87B MIR6727 TTLL10-AS1 LOC100130417 LOC101928626 TMEM240 MTND2P28 MIR6859-1 MIR429 SLC35E2B MTND1P23 ATAD3B OR4F16 SAMD11 VWA1 LOC105378947 PLEKHN1 TNFRSF4 GNB1 LOC100133331 LOC100129534 PUSL1 SCNN1D LOC105378948 LOC100288069 CDK11B UBE2J2 CFAP74 AURKAIP1 MMP23A MIR200B MRPL20 LOC107984841 LOC107985729 LOC105378591 OR4F29 NOC2L FNDC10 ANKRD65 FAM41C C1orf159 FAM138A SDF4 LOC100287934 LOC100132287 LINC01128 ATAD3C MIR6723 LOC100506504 FAAP20 LINC00115 ISG15 MIR1302-2 KLHL17 MIR200A MIR6808 RNF223 PERM1 MIR6726 FAM132A B3GALT6 CDK11A ACAP3 DVL1 HES4 TMEM52 SLC35E2 LOC100134822 TAS1R3 LOC107985728 AGRN TMEM88B SSU72 MXRA8 GABRD MIR6859-2 LOC148413 LOC284600 CCNL2 LOC100288175 LOC105378589 LOC102724312 LOC729737 LOC105378949 ATAD3A LOC105378592 TTLL10 PRKCZ MIB2
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss PUSL1 CPSF3L MIR6726 ACAP3 MIR6727 CPTP DVL1 MIR6808 TAS1R3
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss PUSL1 CPSF3L SCNN1D MIR6726 ACAP3 MIR6727 CPTP DVL1 MXRA8 MIR6808 AURKAIP1 TAS1R3
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss CPSF3L ACAP3 LINC01342 CPTP DVL1 C1orf159 TNFRSF4 SDF4 TNFRSF18 TAS1R3 PUSL1 SCNN1D MXRA8 UBE2J2 AURKAIP1 MIR200B MIR200A MIR6727 TTLL10-AS1 MIR6808 RNF223 MIR6726 MIR429 FAM132A B3GALT6 TTLL10
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion PUSL1 CPSF3L SCNN1D MIR6726 ACAP3 MIR6727 CPTP DVL1 MXRA8 MIR6808 AURKAIP1 TAS1R3
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication CPSF3L ACAP3 LINC01342 CPTP C1orf159 TNFRSF4 SDF4 TNFRSF18 TAS1R3 AGRN PUSL1 SCNN1D LOC105378948 UBE2J2 MIR200B MIR200A MIR6727 TTLL10-AS1 LOC100288175 RNF223 MIR6726 MIR429 FAM132A B3GALT6 TTLL10
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss CPSF3L LINC01342 CPTP C1orf159 SDF4 TNFRSF18 LOC100287934 LINC01128 ATAD3C LINC00115 ISG15 KLHL17 NADK MMP23B MIR200A FAM87B MIR6727 TTLL10-AS1 LOC100130417 MIR6808 TMEM240 RNF223 PERM1 MIR6726 MIR429 SLC35E2B FAM132A B3GALT6 ATAD3B SAMD11 VWA1 CDK11A ACAP3 DVL1 HES4 PLEKHN1 TNFRSF4 SLC35E2 TAS1R3 LOC107985728 AGRN PUSL1 SCNN1D LOC105378948 TMEM88B SSU72 LOC100288069 MXRA8 CDK11B UBE2J2 AURKAIP1 MMP23A MIR200B MRPL20 LOC148413 LOC284600 CCNL2 LOC100288175 LOC102724312 LOC107985729 ATAD3A NOC2L TTLL10 FNDC10 MIB2 ANKRD65 FAM41C
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain PUSL1 CPSF3L SCNN1D MIR6726 ACAP3 MIR6727 CPTP DVL1 MXRA8 MIR6808 TAS1R3
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion CPSF3L ACAP3 LINC01342 CPTP DVL1 C1orf159 TNFRSF4 SDF4 TNFRSF18 TAS1R3 ATAD3C PUSL1 SCNN1D TMEM88B SSU72 MXRA8 CDK11B UBE2J2 AURKAIP1 MIR200B MRPL20 MMP23B MIR200A LOC148413 MIR6727 TTLL10-AS1 CCNL2 MIR6808 TMEM240 LOC102724312 LOC107985729 MIR6726 MIR429 ATAD3A FAM132A B3GALT6 TTLL10 FNDC10 MIB2 ANKRD65 ATAD3B VWA1
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss CPSF3L ACAP3 MIR6727 CPTP DVL1 MIR6808 TAS1R3 PUSL1 SCNN1D MIR6726 MXRA8 UBE2J2 AURKAIP1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain CPSF3L ACAP3 LINC01342 CPTP DVL1 HES4 PLEKHN1 C1orf159 TNFRSF4 SDF4 TNFRSF18 TAS1R3 LOC107985728 AGRN PUSL1 SCNN1D LOC105378948 TMEM88B MXRA8 ISG15 UBE2J2 KLHL17 AURKAIP1 MIR200B MRPL20 MIR200A LOC148413 MIR6727 LOC284600 TTLL10-AS1 LOC100130417 CCNL2 MIR6808 LOC100288175 RNF223 PERM1 MIR6726 MIR429 FAM132A B3GALT6 NOC2L TTLL10 ANKRD65 SAMD11
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain CPSF3L ACAP3 MIR6727 TTLL10-AS1 TNFRSF4 SDF4 TNFRSF18 PUSL1 SCNN1D MIR6726 MIR429 FAM132A UBE2J2 B3GALT6 TTLL10 MIR200B MIR200A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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