Hs01833660_cn

• Gene Symbol: C17orf62
• Assay Reference Genome Location: Chr.17:82444146 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 79415
• Gene Name: chromosome 17 open reading frame 62
• Gene Aliases: -
• Location: Chr.17:82442586-82450831 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C17orf62	NM_001033046.3			NP_001028218.1
	NM_001100407.2			NP_001093877.1
	NM_001100408.2			NP_001093878.1
	NM_001193653.1			NP_001180582.1
	NM_001193654.1			NP_001180583.1
	NM_001193655.1			NP_001180584.1
	NM_001193657.1			NP_001180586.1
	NR_036514.1
	NR_036516.1
	NR_036517.1
	NR_036518.1
	XM_006722293.2			XP_006722356.1
	XM_011523606.2			XP_011521908.1
	XM_017025072.1			XP_016880561.1
	XM_017025073.1			XP_016880562.1
	XM_017025074.1			XP_016880563.1
	XM_017025075.1			XP_016880564.1
	XM_017025076.1			XP_016880565.1
	XM_017025077.1			XP_016880566.1
	XM_017025078.1			XP_016880567.1
	AF269290.1			AAG23173.1
	AK027743.1			BAB55335.1
	AK054876.1			BAB70818.1
	AK056342.1			BAB71156.1
	AK074950.1
	AK090484.1			BAC03465.1
	AK092865.1
	AK225389.1
	BC003595.1			AAH03595.1
	BC004171.2			AAH04171.1
	BG716477.1
	BM147030.1
	BM801484.1
	CN260096.1
	DA008508.1
	DA342707.1
	DA500882.1
	DB113745.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1160502	Chr.17:82411695 - 82526070 on Build GRCh38	Deletion	FOXK2 HEXDC C17orf62 OGFOD3 NARF
esv3641424	Chr.17:82434625 - 82462586 on Build GRCh38	Gain	HEXDC C17orf62 NARF
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	RAB40B FOXK2 HEXDC C17orf62 OGFOD3 NARF MIR4525 WDR45B
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	ARL16 ACTG1 LOC105376791 SECTM1 LINC00482 LOC100130370 MIR3186 ARHGDIA CD7 FN3K GCGR LOC101929552 C17orf89 PDE6G CCDC57 LRRC45 ALYREF ASPSCR1 AATK MIR4740 MAFG P4HB MRPL12 FOXK2 PCYT2 LOC105371944 NARF PPP1R27 LOC105376790 OXLD1 RAC3 FASN FN3KRP GPS1 MCRIP1 SLC38A10 MIR6787 CSNK1D FAAP100 TMEM105 NOTUM MIR6786 RAB40B SIRT7 NPLOC4 HGS SLC16A3 SNORD134 BAHCC1 STRA13 CEP131 PYCR1 DUS1L ZNF750 HEXDC UTS2R OGFOD3 TEPSIN LOC105371925 FSCN2 AATK-AS1 DCXR SLC25A10 RFNG TBCD LOC101929511 NPB WDR45B ANAPC11 TSPAN10 C17orf62 TEX19 B3GNTL1 MIR4525 CCDC137 MAFG-AS1 MYADML2
nsv1067160	Chr.17:82381853 - 82446450 on Build GRCh38	Loss	HEXDC C17orf62 OGFOD3 LOC105376790
nsv469561	Chr.17:82251148 - 82472274 on Build GRCh38	Loss	HEXDC C17orf62 UTS2R TEX19 SECTM1 OGFOD3 NARF LOC105376790 LOC101929511 CSNK1D CD7
nsv833574	Chr.17:82419054 - 82579254 on Build GRCh38	Gain	FOXK2 HEXDC C17orf62 NARF
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	LOC105376791 SECTM1 ARHGDIA CD7 FN3K LOC101929552 CCDC57 LRRC45 ALYREF ASPSCR1 MAFG P4HB FOXK2 PCYT2 LOC105371944 NARF PPP1R27 LOC105376790 RAC3 FASN FN3KRP GPS1 MCRIP1 MIR6787 CSNK1D NOTUM RAB40B SIRT7 METRNL SLC16A3 SNORD134 STRA13 PYCR1 DUS1L ZNF750 HEXDC UTS2R OGFOD3 DCXR RFNG TBCD LOC101929511 NPB WDR45B ANAPC11 C17orf62 TEX19 B3GNTL1 MIR4525 MAFG-AS1 MYADML2
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	RAB40B FOXK2 LOC105376791 SECTM1 NARF LOC105376790 TBCD LOC101929511 WDR45B CD7 FN3K FN3KRP ZNF750 LOC101929552 HEXDC C17orf62 UTS2R TEX19 OGFOD3 MIR4525 CSNK1D
nsv1067194	Chr.17:82294731 - 82653129 on Build GRCh38	Gain	FOXK2 HEXDC C17orf62 UTS2R TEX19 SECTM1 OGFOD3 NARF LOC105376790 WDR45B CD7

More Information

Additional Information:

For this assay, SNP(s) [rs67228117] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Function(s)

protein binding