Hs01833660_cn

• Gene Symbol: C17orf62
• Assay Reference Genome Location: Chr.17:82444146 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 79415
• Gene Name: chromosome 17 open reading frame 62
• Gene Aliases: -
• Location: Chr.17:82442586-82450831 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C17orf62	NM_001033046.3			NP_001028218.1
	NM_001100407.2			NP_001093877.1
	NM_001100408.2			NP_001093878.1
	NM_001193653.1			NP_001180582.1
	NM_001193654.1			NP_001180583.1
	NM_001193655.1			NP_001180584.1
	NM_001193657.1			NP_001180586.1
	NR_036514.1
	NR_036516.1
	NR_036517.1
	NR_036518.1
	XM_006722293.2			XP_006722356.1
	XM_011523606.2			XP_011521908.1
	XM_017025072.1			XP_016880561.1
	XM_017025073.1			XP_016880562.1
	XM_017025074.1			XP_016880563.1
	XM_017025075.1			XP_016880564.1
	XM_017025076.1			XP_016880565.1
	XM_017025077.1			XP_016880566.1
	XM_017025078.1			XP_016880567.1
	AF269290.1			AAG23173.1
	AK027743.1			BAB55335.1
	AK054876.1			BAB70818.1
	AK056342.1			BAB71156.1
	AK074950.1
	AK090484.1			BAC03465.1
	AK092865.1
	AK225389.1
	BC003595.1			AAH03595.1
	BC004171.2			AAH04171.1
	BG716477.1
	BM147030.1
	BM801484.1
	CN260096.1
	DA008508.1
	DA342707.1
	DA500882.1
	DB113745.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1160502	Chr.17:82411695 - 82526070 on Build GRCh38	Deletion	FOXK2 OGFOD3 NARF C17orf62 HEXDC
esv3641424	Chr.17:82434625 - 82462586 on Build GRCh38	Gain	NARF C17orf62 HEXDC
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	FOXK2 OGFOD3 NARF C17orf62 HEXDC MIR4525 RAB40B WDR45B
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	ASPSCR1 B3GNTL1 FSCN2 FOXK2 NARF LOC100130370 ARL16 LOC101929511 LINC00482 MAFG-AS1 PPP1R27 MRPL12 FASN ZNF750 CCDC137 P4HB ANAPC11 CD7 RAC3 ACTG1 PCYT2 CCDC57 SIRT7 MIR4740 OGFOD3 OXLD1 STRA13 FN3KRP TEX19 UTS2R ARHGDIA LOC105371925 C17orf62 TEPSIN LOC101929552 FN3K MYADML2 MIR3186 SECTM1 PDE6G CSNK1D ALYREF MIR6786 SLC25A10 DUS1L NPB RFNG GPS1 SLC38A10 NOTUM FAAP100 HEXDC NPLOC4 LRRC45 SNORD134 TSPAN10 PYCR1 GCGR RAB40B AATK-AS1 MCRIP1 AATK LOC105371944 BAHCC1 CEP131 SLC16A3 MIR4525 MIR6787 WDR45B MAFG TBCD DCXR LOC105376791 LOC105376790 HGS TMEM105 C17orf89
nsv1067160	Chr.17:82381853 - 82446450 on Build GRCh38	Loss	OGFOD3 C17orf62 HEXDC LOC105376790
nsv469561	Chr.17:82251148 - 82472274 on Build GRCh38	Loss	TEX19 UTS2R OGFOD3 NARF C17orf62 HEXDC SECTM1 CSNK1D LOC101929511 CD7 LOC105376790
nsv833574	Chr.17:82419054 - 82579254 on Build GRCh38	Gain	FOXK2 NARF C17orf62 HEXDC
nsv1067194	Chr.17:82294731 - 82653129 on Build GRCh38	Gain	TEX19 FOXK2 UTS2R OGFOD3 NARF C17orf62 HEXDC SECTM1 CD7 LOC105376790 WDR45B
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	FOXK2 OGFOD3 NARF SECTM1 CSNK1D LOC101929511 MIR4525 WDR45B FN3KRP TBCD ZNF750 TEX19 UTS2R LOC105376791 C17orf62 HEXDC CD7 LOC105376790 RAB40B LOC101929552 FN3K
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	ASPSCR1 B3GNTL1 FOXK2 NARF LOC101929511 MAFG-AS1 PPP1R27 FASN ZNF750 P4HB ANAPC11 CD7 RAC3 PCYT2 METRNL CCDC57 SIRT7 OGFOD3 STRA13 FN3KRP TEX19 UTS2R ARHGDIA C17orf62 LOC101929552 FN3K MYADML2 SECTM1 CSNK1D ALYREF DUS1L NPB RFNG GPS1 NOTUM HEXDC LRRC45 SNORD134 PYCR1 RAB40B MCRIP1 LOC105371944 SLC16A3 MIR4525 MIR6787 WDR45B MAFG TBCD DCXR LOC105376791 LOC105376790

More Information

Additional Information:

For this assay, SNP(s) [rs67228117] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Function(s)

protein binding