Hs01833989_cn

• Gene Symbol: TSPAN3
• Assay Reference Genome Location: Chr.15:77046281 on build GRCh38
• Cytoband: 15q24.3

Target Gene Details

• Entrez Gene ID: 10099
• Gene Name: tetraspanin 3
• Gene Aliases: TM4-A, TM4SF8, TSPAN-3
• Location: Chr.15:77044017-77071228 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSPAN3	NM_001168412.1	6	1398	NP_001161884.1
	NM_005724.5	7	1590	NP_005715.1
	NM_198902.2	6	1515	NP_944492.1
	XM_017021857.1	7	1199	XP_016877346.1
	AF133423.1	7	1390	AAF08362.1
	AK001305.1	7	1436	BAA91613.1
	AK001310.1	7	1422	BAA91615.1
	AK001326.1	7	1533	BAA91627.1
	AK027793.1	4	2641
	AK075336.1	7	1471
	AK075482.1	6	1396
	AK298157.1	6	1279
	BC000704.2	7	1491	AAH00704.1
	BC004280.1	7	1452	AAH04280.1
	BC009248.2	7	1455	AAH09248.1
	BC011206.1	7	1484	AAH11206.1
	M69023.1	3	864

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517068	Chr.15:76962203 - 77088880 on Build GRCh38	Gain+Loss	TSPAN3 PSTPIP1
esv2760041	Chr.15:76878209 - 77081106 on Build GRCh38	Gain	TSPAN3 RCN2 PSTPIP1 SCAPER
nsv833058	Chr.15:76943554 - 77101298 on Build GRCh38	Loss	TSPAN3 PEAK1 RCN2 PSTPIP1
esv2749898	Chr.15:75764003 - 77933523 on Build GRCh38	Deletion	LOC441728 UBE2Q2 TSPAN3 PEAK1 LINGO1 RCN2 PSTPIP1 LINGO1-AS2 LOC101929439 FBXO22 LOC645752 ETFA MIR3713 NRG4 LOC101929457 LINGO1-AS1 HMG20A LINC00597 SCAPER TYRO3P FBXO22-AS1 TMEM266 ISL2
nsv1048833	Chr.15:77002252 - 77046918 on Build GRCh38	Gain	TSPAN3 PSTPIP1
nsv1040852	Chr.15:76867896 - 77845199 on Build GRCh38	Gain	TSPAN3 PEAK1 LOC101929457 LINGO1 RCN2 PSTPIP1 LINGO1-AS2 LINGO1-AS1 HMG20A LINC00597 SCAPER
nsv1622	Chr.15:77022478 - 77051924 on Build GRCh38	Insertion	TSPAN3 PSTPIP1
nsv509576	Chr.15:76962019 - 77047336 on Build GRCh38	Insertion	TSPAN3 PSTPIP1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cell surface receptor signaling pathway
biological_process

Function(s)

molecular_function