accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other SPSB3 CNV Assays ›
Gene Symbol
SPSB3
Assay Reference Genome
Location

Chr.16:1777998 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01839506_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 90864

Gene Name:

 splA/ryanodine receptor domain and SOCS box containing 3

Gene Aliases:

 C16orf31, SSB3

Location:

 Chr.16:1776712-1782605 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPSB3 NM_001324081.1 NP_001311010.1
NM_080861.3 NP_543137.2
XM_005255673.4 XP_005255730.1
AF403028.1 AAL57347.1
AK074190.1
AK302041.1
BC007588.1
BC024244.1 AAH24244.1
BC041897.1 AAH41897.1
BC047441.1
BI768095.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MIR3177 NME3 SPSB3 MRPS34 EME2 NUBP2 MAPK8IP3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR6859-4 MIR6511B1 SNHG19 SNORA10 SLC9A3R2 SNORA64 TMEM204 PRSS27 PRSS29P RGS11 ATP6V0C MIR5587 BRICD5 CEMP1 PDIA2 MRPS34 LMF1-AS1 ERVK13-1 LMF1 UNKL LINC00254 PIGQ MLST8 CACNA1H MAPK8IP3 IGFALS FBXL16 LOC105371045 DECR2 RHBDL1 NPRL3 ABCA17P HBZ ECI1 RPL23AP5 SNHG9 MSRB1 LOC105371047 TBC1D24 NHLRC4 MEIOB SYNGR3 PKD1 FAHD1 FAM234A RPS2 TMEM8A EME2 NME4 CCNF MIR4717 MIR3177 METRN LOC105371184 RNF151 NOXO1 WDR90 MIR1225 WASIR2 TPSG1 DNASE1L2 CHTF18 RPL3L SPSB3 HBM HBQ1 MIR3677 TPSB2 FLJ42627 HBA1 LOC729652 TRAF7 MIR6767 ARHGDIG C16orf59 JMJD8 RNPS1 RAB40C PGP LOC105371046 LOC100134368 NUBP2 MCRIP2 WFIKKN1 MIR662 SOX8 BAIAP3 LOC652276 MIR4516 SNORD60 LOC107987233 KCTD5 NPW NME3 RHBDF1 IFT140 MSLN FAM173A NARFL METTL26 ZNF598 LUC7L LOC107984876 GFER DDX11L10 MIR3176 PTX4 C1QTNF8 AXIN1 HBA2 TSC2 TBL3 LINC00235 MIR3180-5 NTN3 TELO2 PDPK1 CCDC154 E4F1 SSTR5-AS1 CASKIN1 WDR24 LOC100287175 MIR940 GNPTG RAB11FIP3 STUB1 UBE2I RPUSD1 CAPN15 LOC101929280 AMDHD2 SNRNP25 NDUFB10 ABCA3 C16orf91 HS3ST6 MPG HAGH SNORA78 MRPL28 MIR3178 TPSAB1 LOC105371038 HAGHL HN1L LOC105371049 CCDC78 TSR3 PRR35 MIR6768 LOC106660606 PRR25 RAB26 NTHL1 SSTR5 TPSD1 RHOT2 CRAMP1 POLR3K CLCN7 GNG13
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss NME3 HAGH SPSB3 MRPS34 EME2 NUBP2 MAPK8IP3 IGFALS
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MIR3177 NME3 SPSB3 MRPS34 EME2 NUBP2 MAPK8IP3 IGFALS
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss NME3 SPSB3 MRPS34 EME2 NUBP2 MAPK8IP3 IGFALS
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss HN1L SPSB3 EME2 MAPK8IP3 IGFALS MIR3177 NME3 HAGH CRAMP1 IFT140 MRPS34 LOC105371046 NUBP2
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss NME3 SPSB3 MRPS34 EME2 NUBP2 MAPK8IP3 IGFALS
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss LOC105371047 MEIOB HN1L FAHD1 SPSB3 EME2 TMEM204 MAPK8IP3 IGFALS MIR3177 NME3 HAGH CRAMP1 TELO2 IFT140 MRPS34 LOC105371046 NUBP2
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain NME3 SPSB3 MRPS34 EME2 NUBP2 MAPK8IP3 IGFALS
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss NME3 SPSB3 MRPS34 EME2 MAPK8IP3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MEIOB HN1L FAHD1 SPSB3 EME2 MAPK8IP3 IGFALS MIR3177 NME3 HAGH CRAMP1 MRPS34 NUBP2
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss NME3 SPSB3 MRPS34 EME2 NUBP2 MAPK8IP3 IGFALS
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MIR3177 NME3 HAGH FAHD1 SPSB3 MRPS34 EME2 NUBP2 MAPK8IP3 IGFALS

Back To Top

More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


Back To Top

Related Products