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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:972992 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01857921_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 10 - Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC284600 KLHL17 LOC100288175 PERM1 LOC105378948 LOC100130417 HES4 LOC107985728 NOC2L AGRN ISG15 PLEKHN1 C1orf159 RNF223 SAMD11
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR429 MIR200B SCNN1D LOC100288175 LOC107985729 PERM1 UBE2J2 LOC105378949 VWA1 TAS1R3 MRPL20 LOC105378592 NADK MIR6859-2 PLEKHN1 DVL1 RNF223 MORN1 TMEM52 CPTP SAMD11 MIR6859-1 SSU72 LOC102725121 LINC00115 ATAD3B B3GALT6 OR4F5 LOC107984841 LOC100134822 LOC107985728 TNFRSF4 FAM41C LOC284600 LINC01342 WASH7P CDK11A LOC148413 LOC105378948 SDF4 LOC729737 LOC100130417 MIR200A MIR6808 ATAD3C OR4F16 FAM138A CCNL2 MMP23B KLHL17 TMEM240 LOC105378947 CPSF3L AGRN LOC100287934 C1orf159 TTLL10 LOC105378589 LOC105378591 MXRA8 LOC102724312 SLC35E2 LOC100129534 LOC100132287 SLC35E2B ATAD3A MIR1302-2 MTND1P23 PUSL1 HES4 LOC100133331 NOC2L ISG15 CFAP74 MIR6726 MIR6723 CDK11B MTND2P28 MMP23A ACAP3 LOC100506504 PRKCZ FNDC10 LOC100288069 CALML6 ANKRD65 TTLL10-AS1 FAM87B LINC01128 AURKAIP1 FAM132A TNFRSF18 GABRD OR4F29 MIR6727 SKI FAAP20 LOC101928626 MIB2 DDX11L1 GNB1 TMEM88B
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC284600 KLHL17 LOC100288175 PERM1 LOC105378948 LOC100130417 HES4 LOC107985728 NOC2L AGRN ISG15 PLEKHN1 C1orf159 RNF223 SAMD11
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC100130417 LOC107985728 NOC2L LOC284600 PLEKHN1 KLHL17 PERM1 SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain MIR429 MIR200B KLHL17 LOC100288175 PERM1 TTLL10-AS1 LOC107985728 AGRN C1orf159 TTLL10 TNFRSF18 TNFRSF4 FAM41C LOC284600 LINC01342 LOC105378948 SDF4 LOC100130417 MIR200A HES4 NOC2L ISG15 PLEKHN1 RNF223 SAMD11
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC100288069 LINC00115 KLHL17 LOC100288175 PERM1 LOC105378947 LOC107984841 FAM87B LOC107985728 AGRN LINC01128 LOC100287934 C1orf159 FAM41C LOC284600 MTND1P23 LOC105378948 LOC100130417 HES4 LOC100133331 NOC2L ISG15 PLEKHN1 LOC101928626 MIR6723 RNF223 OR4F16 MTND2P28 SAMD11
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR429 MIR200B CCNL2 MMP23B KLHL17 SCNN1D LOC100288175 TMEM240 LOC107985729 PERM1 UBE2J2 CPSF3L VWA1 AGRN LOC100287934 C1orf159 TTLL10 MXRA8 LOC102724312 TAS1R3 SLC35E2 MRPL20 SLC35E2B ATAD3A NADK PUSL1 HES4 NOC2L ISG15 PLEKHN1 MIR6726 CDK11B DVL1 RNF223 MMP23A ACAP3 CPTP SAMD11 SSU72 FNDC10 LOC100288069 LINC00115 ATAD3B ANKRD65 B3GALT6 TTLL10-AS1 FAM87B LOC107985728 LINC01128 AURKAIP1 FAM132A TNFRSF18 TNFRSF4 FAM41C MIR6727 LOC284600 LINC01342 CDK11A LOC148413 LOC105378948 SDF4 LOC100130417 MIR200A MIR6808 ATAD3C MIB2 TMEM88B
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss MIR429 MIR200B LINC00115 KLHL17 LOC100288175 PERM1 UBE2J2 B3GALT6 TTLL10-AS1 FAM87B LOC107985728 AGRN LINC01128 C1orf159 TTLL10 FAM132A TNFRSF18 TNFRSF4 FAM41C LOC284600 LINC01342 LOC105378948 SDF4 LOC100130417 MIR200A HES4 NOC2L ISG15 PLEKHN1 RNF223 SAMD11
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain LINC01342 KLHL17 LOC100288175 PERM1 LOC105378948 HES4 NOC2L AGRN ISG15 PLEKHN1 C1orf159 RNF223 SAMD11
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC100130417 HES4 LOC107985728 NOC2L LOC284600 AGRN ISG15 PLEKHN1 KLHL17 PERM1 SAMD11
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion MIR429 MIR200B LINC01342 KLHL17 LOC100288175 PERM1 LOC105378948 SDF4 MIR200A TTLL10-AS1 HES4 NOC2L AGRN ISG15 PLEKHN1 C1orf159 TTLL10 RNF223 TNFRSF18 TNFRSF4 SAMD11
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR429 MIR200B CCNL2 KLHL17 SCNN1D LOC100288175 PERM1 ANKRD65 UBE2J2 B3GALT6 CPSF3L TTLL10-AS1 LOC107985728 AGRN C1orf159 TTLL10 MXRA8 AURKAIP1 FAM132A TAS1R3 TNFRSF18 TNFRSF4 MRPL20 MIR6727 LOC284600 LINC01342 LOC148413 LOC105378948 SDF4 LOC100130417 MIR200A PUSL1 HES4 NOC2L ISG15 PLEKHN1 MIR6726 MIR6808 DVL1 RNF223 ACAP3 CPTP SAMD11 TMEM88B
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC100130417 HES4 LOC107985728 NOC2L LOC284600 LINC01128 PLEKHN1 KLHL17 PERM1 FAM41C SAMD11

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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