Hs01858164_cn

• Gene Symbol: ADGRA1
• Assay Reference Genome Location: Chr.10:133093193 on build GRCh38
• Cytoband: 10q26.3

Target Gene Details

• Entrez Gene ID: 84435
• Gene Name: adhesion G protein-coupled receptor A1
• Gene Aliases: GPR123
• Location: Chr.10:133070929-133131675 on Build GRCh38
• Assay Gene Location: Within Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ADGRA1	NM_001083909.2			NP_001077378.1
	XM_005252695.1	10	1968	XP_005252752.1
	XM_017016779.1			XP_016872268.1
	AK124728.1
	AY181241.1	10	1968	AAO27353.1
	BG818167.1
	CB045391.1
	DA208698.1
	EF536972.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv998n100	Chr.10:132998894 - 133170978 on Build GRCh38	Gain	ADGRA1 KNDC1 ADGRA1-AS1
esv2759793	Chr.10:133030918 - 133619181 on Build GRCh38	Gain+Loss	SPRN MTG1 PRAP1 MIR202 ZNF511 ADGRA1 MIR3944 PAOX CALY ADAM8 SYCE1 ECHS1 FUOM KNDC1 TUBGCP2 ADGRA1-AS1 MIR202HG VENTX SPRNP1 SCART1 CYP2E1 UTF1
esv3625022	Chr.10:132998655 - 133120915 on Build GRCh38	Gain	ADGRA1 ADGRA1-AS1
esv3625015	Chr.10:132889012 - 133114687 on Build GRCh38	Gain	LINC01168 ADGRA1 LINC01166 LINC01167 CFAP46 ADGRA1-AS1
nsv552526	Chr.10:132699017 - 133103793 on Build GRCh38	Gain	NKX6-2 LINC01168 INPP5A ADGRA1 LINC01166 LINC01167 CFAP46 ADGRA1-AS1
nsv470979	Chr.10:133033478 - 133118280 on Build GRCh38	Loss	ADGRA1 ADGRA1-AS1
nsv552540	Chr.10:133085338 - 133102541 on Build GRCh38	Loss	ADGRA1 ADGRA1-AS1
nsv552539	Chr.10:133061918 - 133103793 on Build GRCh38	Loss	ADGRA1 ADGRA1-AS1
dgv1464n54	Chr.10:132900981 - 133134139 on Build GRCh38	Gain	LINC01168 ADGRA1 LINC01166 LINC01167 CFAP46 ADGRA1-AS1
nsv1054934	Chr.10:130334322 - 133158679 on Build GRCh38	Gain	TCERG1L PWWP2B LINC01168 C10orf91 ADGRA1 LINC01166 LINC01167 TCERG1L-AS1 LOC107984282 DPYSL4 NKX6-2 LOC105378568 STK32C INPP5A MIR378C CFAP46 LINC01164 ADGRA1-AS1 JAKMIP3 PPP2R2D LRRC27 BNIP3
nsv528260	Chr.10:132859348 - 133620799 on Build GRCh38	Loss	SPRN MTG1 PRAP1 MIR202 MIR3944 LINC01166 PAOX SYCE1 FUOM TUBGCP2 VENTX SPRNP1 CYP2E1 UTF1 LINC01168 ZNF511 ADGRA1 LINC01167 CALY ADAM8 ECHS1 KNDC1 CFAP46 ADGRA1-AS1 MIR202HG SCART1
nsv952703	Chr.10:133037897 - 133143896 on Build GRCh38	Deletion	ADGRA1 ADGRA1-AS1
nsv832036	Chr.10:133089509 - 133368232 on Build GRCh38	Loss	PRAP1 MIR202 ZNF511 ADGRA1 CALY ADAM8 ECHS1 FUOM KNDC1 TUBGCP2 MIR202HG VENTX UTF1

More Information

Additional Information:

For this assay, SNP(s) [rs41283463] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor

Gene Ontology Categories:

Process(es)

signal transduction
cell surface receptor signaling pathway
G-protein coupled receptor signaling pathway

Function(s)

G-protein coupled receptor activity