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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147212479 on build GRCh38
Cytoband
1q21.1
Assay ID Hs01868257_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 5 943 NP_001138301.1
NM_001144830.2 4 1153 NP_001138302.1
NM_001461.3 5 933 NP_001452.2
XM_005272946.4 5 907 XP_005273003.1
XM_005272947.4 5 651 XP_005273004.1
XM_005272948.4 5 634 XP_005273005.1
XM_006711244.3 5 923 XP_006711307.1
XM_006711245.3 5 923 XP_006711308.1
XM_011509350.2 5 938 XP_011507652.1
XM_011509351.2 4 670 XP_011507653.1
XM_017000801.1 4 682 XP_016856290.1
XM_017000802.1 4 452 XP_016856291.1
AK022172.1 4 1143 BAB13975.1
AK222728.1 5 648 BAD96448.1
AK225739.1 5 658
AK314647.1 5 861
BC035687.1 4 826 AAH35687.1
L37080.1 5 619 AAA67849.1
Z47553.1 5 625 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss RNVU1-3 MIR6077 PDE4DIP LOC105371226 POLR3GL PDZK1 GNRHR2 PIAS3 ANKRD35 LOC100505824 ACP6 GJA5 HYDIN2 RNVU1-7 LOC100132057 GJA8 GPR89A PRKAB2 LOC284561 RNU1-13P BCL9 LOC728989 NBPF10 CD160 ANKRD34A NUDT4P1 LOC105371242 LOC101927468 NBPF14 RNVU1-6 GPR89B MIR6736 LOC100996517 NUDT4P2 PDIA3P1 NUDT17 PDZK1P1 MIR5087 NBPF13P TXNIP NOTCH2NL LOC100996763 RBM8A CHD1L RNVU1-8 RNVU1-1 NBPF12 LIX1L ITGA10 POLR3C CH17-408M7.1 NBPF11 HFE2 RNF115 LINC00624 LOC101928979 PEX11B PPIAL4G FMO5 LINC01138
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain RNVU1-3 NUDT4P2 MIR6077 PDE4DIP LOC105371226 PDIA3P1 PDZK1P1 MIR5087 NBPF13P NOTCH2NL LOC100505824 ACP6 LOC100996763 GJA5 HYDIN2 RNVU1-7 LOC100132057 GJA8 CHD1L RNVU1-8 RNVU1-1 NBPF12 PRKAB2 LOC284561 RNU1-13P CH17-408M7.1 BCL9 NBPF11 LOC728989 NBPF10 NUDT4P1 LINC00624 LOC105371242 LOC101928979 PPIAL4G LOC101927468 NBPF14 RNVU1-6 FMO5 GPR89B LINC01138 LOC100996517
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss RNVU1-3 NUDT4P2 MIR6077 PDE4DIP LOC105371226 PDIA3P1 PDZK1P1 MIR5087 NBPF13P NOTCH2NL LOC100505824 ACP6 LOC100996763 GJA5 HYDIN2 RNVU1-7 LOC100132057 GJA8 CHD1L RNVU1-8 RNVU1-1 NBPF12 PRKAB2 LOC284561 RNU1-13P CH17-408M7.1 BCL9 NBPF11 LOC728989 NBPF10 NUDT4P1 LINC00624 LOC105371242 PPIAL4G LOC101927468 NBPF14 FMO5 GPR89B LINC01138 LOC100996517
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion RNVU1-3 NUDT4P2 MIR6077 PDE4DIP LOC105371226 POLR3GL PDIA3P1 PDZK1P1 MIR5087 NBPF13P TXNIP NOTCH2NL LOC100505824 ACP6 LOC100996763 GJA5 HYDIN2 RNVU1-7 LOC100132057 GJA8 CHD1L RNVU1-8 RNVU1-1 NBPF12 PRKAB2 LIX1L LOC284561 RNU1-13P CH17-408M7.1 BCL9 NBPF11 LOC728989 HFE2 NBPF10 ANKRD34A NUDT4P1 LINC00624 LOC105371242 LOC101928979 PPIAL4G LOC101927468 NBPF14 RNVU1-6 FMO5 GPR89B LINC01138 LOC100996517
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication RNVU1-3 NUDT4P2 MIR6077 PDE4DIP LOC105371226 PDIA3P1 PDZK1P1 MIR5087 NBPF13P NOTCH2NL LOC100505824 ACP6 LOC100996763 GJA5 HYDIN2 RNVU1-7 LOC100132057 GJA8 CHD1L RNVU1-8 RNVU1-1 NBPF12 PRKAB2 LOC284561 RNU1-13P CH17-408M7.1 BCL9 NBPF11 LOC728989 NUDT4P1 LINC00624 LOC105371242 PPIAL4G LOC101927468 NBPF14 FMO5 GPR89B LINC01138 LOC100996517
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain RNVU1-3 NUDT4P2 MIR6077 PDE4DIP LOC105371226 PDIA3P1 PDZK1P1 MIR5087 NBPF13P NOTCH2NL LOC100505824 ACP6 LOC100996763 GJA5 HYDIN2 RNVU1-7 LOC100132057 GJA8 CHD1L RNVU1-8 RNVU1-1 NBPF12 PRKAB2 LOC284561 RNU1-13P CH17-408M7.1 BCL9 NBPF11 LOC728989 NBPF10 NUDT4P1 LINC00624 LOC105371242 LOC101928979 PPIAL4G LOC101927468 NBPF14 RNVU1-6 FMO5 GPR89B LINC01138 LOC100996517
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion RNVU1-3 NUDT4P2 MIR6077 PDE4DIP LOC105371226 PDIA3P1 NBPF9 PDZK1P1 MIR5087 NBPF13P NOTCH2NL LOC100505824 ACP6 LOC100996763 GJA5 HYDIN2 RNVU1-7 LOC100132057 GJA8 CHD1L RNVU1-8 RNVU1-1 NBPF12 PRKAB2 LOC284561 RNU1-13P CH17-408M7.1 BCL9 NBPF11 LOC728989 NBPF10 NUDT4P1 LINC00624 LOC105371242 LOC101928979 PPIAL4G LOC101927468 NBPF14 FMO5 GPR89B LINC01138 LOC100996517
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss CHD1L PDIA3P1 PRKAB2 FMO5

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