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System Message

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Gene Symbol: CTSB
Assay Reference Genome Location: Chr.8:11850871 on build GRCh38
Cytoband: 8p23.1

Assay ID

Hs01870775_cn

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Availability	Made To Order
Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	1508
Gene Name:	cathepsin B
Gene Aliases:	APPS, CPSB
Location:	Chr.8:11842524-11868150 on Build GRCh38
Assay Gene Location:	Overlaps Intron 9 - Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CTSB	NM_001317237.1			NP_001304166.1
	NM_001908.4			NP_001899.1
	NM_147780.3			NP_680090.1
	NM_147781.3			NP_680091.1
	NM_147782.3			NP_680092.1
	NM_147783.3			NP_680093.1
	XM_006716244.2			XP_006716307.1
	XM_006716245.2			XP_006716308.1
	XM_011543812.2			XP_011542114.1
	XM_017013097.1			XP_016868586.1
	XM_017013098.1			XP_016868587.1
	XM_017013099.1			XP_016868588.1
	XM_017013100.1			XP_016868589.1
	XM_017013101.1			XP_016868590.1
	AK075393.1
	AK092070.1
	AK130184.1
	AK290239.1
	AK296845.1
	AK297687.1
	AL543654.3
	BC010240.1			AAH10240.1
	BC095408.1			AAH95408.1
	BG770805.1
	BM008741.1
	BX647765.1			CAI46053.1
	BX647952.1
	BX648239.1	1	3530
	CB997355.1
	DC386022.1
	L16510.1			AAC37547.1
	M14221.1			AAA52129.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3572517	Chr.8:11849011 - 11853761 on Build GRCh38	Loss	CTSB
nsv1034132	Chr.8:11799524 - 12340733 on Build GRCh38	Gain	DEFB135 LOC100133267 USP17L2 FAM66D FAM86B1 DEFB136 ZNF705D DEFB134 FAM90A2P CTSB USP17L7 LOC392196 FDFT1 DEFB130
nsv516685	Chr.8:11841238 - 12712690 on Build GRCh38	Gain+Loss	FAM90A25P DEFB135 LOC729732 LOC100133267 USP17L2 LOC649352 FAM66D FAM86B1 FAM86B2 DEFB136 ZNF705D DEFB134 FAM90A2P CTSB USP17L7 DEFB109P1 LOC100506990 FAM66A LOC392196 DEFB130
esv34042	Chr.8:11840828 - 11869308 on Build GRCh38	Loss	CTSB
nsv1018042	Chr.8:11809987 - 12024876 on Build GRCh38	Gain	DEFB135 CTSB FDFT1 DEFB136 DEFB134
esv3572516	Chr.8:11844191 - 11853761 on Build GRCh38	Loss	CTSB
nsv1032739	Chr.8:11786294 - 11858964 on Build GRCh38	Loss	CTSB NEIL2 FDFT1

More Information

Set Membership:

Intragenic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Function(s) Process(es)

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