accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:406956 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01883206_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1 6 916
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
BX369506.2
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss PKP3 RASSF7 LOC143666 SIGIRR PTDSS2 CDHR5 ANO9 MIR210HG IRF7 IFITM5 PHRF1 MIR210 LMNTD2 IFITM3 RNH1 PGGHG LRRC56 IFITM1 HRAS B4GALNT4 LOC101059906 IFITM2
nsv467633 Chr.11:366710 - 432436 on Build GRCh38 Loss PKP3 SIGIRR ANO9 B4GALNT4
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss DEAF1 SIGIRR PTDSS2 CDHR5 CRACR2B RPLP2 CEND1 TMEM80 PHRF1 DRD4 LMNTD2 TSPAN4 PNPLA2 LOC101059906 CHID1 MUC2 PDDC1 LOC171391 MIR6744 SLC25A22 LOC101927503 PKP3 MUC5AC RASSF7 LOC143666 TALDO1 EPS8L2 ANO9 AP2A2 MIR210HG IRF7 SCT MUC5B PIDD1 MIR210 PANO1 RNH1 LRRC56 HRAS B4GALNT4 MUC6 TOLLIP CD151 POLR2L SNORA52
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain PKP3 SIGIRR ANO9 B4GALNT4
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion PKP3 SIGIRR PTDSS2 RNH1 ANO9 B4GALNT4
dgv1012n100 Chr.11:198510 - 427836 on Build GRCh38 Gain MIR6743 PKP3 ODF3 SIGIRR ANO9 SIRT3 PSMD13 RIC8A IFITM5 NLRP6 BET1L IFITM3 PGGHG IFITM1 B4GALNT4 IFITM2
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PKP3 SIGIRR PTDSS2 ANO9 B4GALNT4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion DEAF1 SIGIRR PTDSS2 CDHR5 CRACR2B RPLP2 CEND1 TMEM80 PHRF1 DRD4 LMNTD2 TSPAN4 PNPLA2 LOC101059906 CHID1 PDDC1 LOC171391 SLC25A22 PKP3 RASSF7 LOC143666 TALDO1 EPS8L2 ANO9 AP2A2 MIR210HG IRF7 SCT PIDD1 MIR210 PANO1 RNH1 LRRC56 HRAS B4GALNT4 CD151 POLR2L SNORA52
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss PKP3 SIGIRR

Back To Top

More Information


Additional Information:

For this assay, SNP(s) [rs112731199] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)


Back To Top

Related Products