Hs01885192_cn

• Gene Symbol: SLBP
• Assay Reference Genome Location: Chr.4:1692833 on build GRCh38
• Cytoband: 4p16.3

Target Gene Details

• Entrez Gene ID: 7884
• Gene Name: stem-loop binding protein
• Gene Aliases: HBP
• Location: Chr.4:1692731-1712741 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLBP	NM_001306074.1	7	2025	NP_001293003.1
	NM_001306075.1	7	2013	NP_001293004.1
	NM_006527.3	8	2130	NP_006518.1
	AK091735.1
	AK093314.1
	AK094257.1
	BC014908.1			AAH14908.1
	BC015703.1			AAH15703.1
	BM976632.1	1	117
	U75679.1			AAB97091.1
	Z71188.1			CAA94918.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv428434	Chr.4:1623665 - 1813048 on Build GRCh38	Gain	LETM1 TMEM129 SLBP TACC3 FAM53A FGFR3
dgv8901n54	Chr.4:1644637 - 1864631 on Build GRCh38	Loss	LETM1 TMEM129 SLBP TACC3 FAM53A FGFR3
nsv593316	Chr.4:1526039 - 1768630 on Build GRCh38	Gain	TMEM129 SLBP TACC3 FAM53A
nsv508989	Chr.4:1623823 - 1846590 on Build GRCh38	Insertion	LETM1 TMEM129 SLBP TACC3 FAM53A FGFR3
dgv5081n100	Chr.4:1676066 - 1710725 on Build GRCh38	Gain	SLBP FAM53A
nsv470000	Chr.4:1522203 - 1722852 on Build GRCh38	Loss	TMEM129 SLBP TACC3 FAM53A

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

termination of RNA polymerase II transcription
mRNA 3'-end processing by stem-loop binding and cleavage
mRNA export from nucleus
histone mRNA metabolic process
nuclear DNA replication
mRNA transport

Function(s)

mRNA binding
protein binding
poly(A) RNA binding
histone pre-mRNA stem-loop binding
histone pre-mRNA DCP binding