Hs01888404_cn

• Gene Symbol: LOC100294362
• Assay Reference Genome Location: Chr.17:80367971 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 100294362
• Gene Name: uncharacterized LOC100294362
• Gene Aliases: -
• Location: Chr.17:80351830-80415168 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC100294362	NR_029376.1
	AK125341.1			BAC86138.1

Target Gene Details

• Entrez Gene ID: 57674
• Gene Name: ring finger protein 213
• Gene Aliases: ALO17, C17orf27, KIAA1618, MYMY2, MYSTR, NET57
• Location: Chr.17:80260820-80398786 on Build GRCh38
• Assay Gene Location: Overlaps Intron 47 - Exon 48

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RNF213	NM_001256071.2			NP_001243000.2
	XM_005257545.4			XP_005257602.2
	XM_005257546.4			XP_005257603.2
	XM_006721995.3			XP_006722058.1
	XM_011525084.2			XP_011523386.1
	XM_011525086.2			XP_011523388.1
	XM_017024905.1			XP_016880394.1
	AB046774.1			BAB13380.1
	AB537889.1
	AK074030.1			BAB84856.1
	AK127358.1
	AK127914.1			BAC87188.1
	AL833201.1			CAH56308.1
	BX640932.1			CAE45967.1
	BX647946.1			CAH56189.1

More Information

Additional Information:

For this assay, SNP(s) [rs77506504] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, non-DGV Variation

Gene Ontology Categories:

Process(es)

protein polyubiquitination
angiogenesis
sprouting angiogenesis
ubiquitin-dependent protein catabolic process
protein ubiquitination
protein homooligomerization
protein autoubiquitination
negative regulation of non-canonical Wnt signaling pathway

Function(s)

ubiquitin-protein transferase activity
zinc ion binding
ligase activity
ATPase activity