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See other CHTF18 CNV Assays ›
Gene Symbol
CHTF18
Assay Reference Genome
Location

Chr.16:795193 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01911895_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63922

Gene Name:

 chromosome transmission fidelity factor 18

Gene Aliases:

 C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL

Location:

 Chr.16:788622-798074 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 14 - Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHTF18 NM_022092.2 NP_071375.1
XM_005255470.1 XP_005255527.1
XM_005255471.3 XP_005255528.1
XM_011522572.1 XP_011520874.1
XM_011522573.1 XP_011520875.1
XM_017023532.1 XP_016879021.1
XM_017023533.1 XP_016879022.1
XM_017023534.1 XP_016879023.1
AK024476.1 BAB15766.1
AK128869.1
BC006278.2 AAH06278.2
BC006437.1 AAH06437.1
BC018184.1 AAH18184.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain CHTF18 RPUSD1 GNG13 MIR662 PRR25 MSLN
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain CHTF18 RPUSD1 GNG13 MIR662 PRR25 MSLN
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NUBP2 MLST8 LOC105371046 RPS2 HN1L CLCN7 FAM173A IFT140 DECR2 TBL3 PIGQ MIR3177 LMF1 STUB1 CHTF18 KCTD5 METTL26 RHBDL1 TSC2 SSTR5 NARFL C16orf91 PGP MIR6768 CCNF SNORA10 ABCA17P MIR6767 NPW RPL23AP5 MIR1225 ARHGDIG CAPN15 RAB40C LOC105371184 NTHL1 NME4 ECI1 TBC1D24 NHLRC4 TPSG1 GNG13 IGFALS NPRL3 SNORA78 UNKL METRN FLJ42627 MRPL28 MRPS34 MSRB1 MIR4717 RNF151 MIR662 PTX4 HS3ST6 WFIKKN1 TPSB2 RNPS1 DDX11L10 TPSAB1 DNASE1L2 HBA1 BAIAP3 WASIR2 RHBDF1 SNORD60 SNHG9 SNORA64 MIR6859-4 RAB11FIP3 LOC105371045 POLR3K LOC652276 CCDC78 UBE2I HAGHL LUC7L SNHG19 PKD1 LMF1-AS1 MIR3677 CASKIN1 PDPK1 MIR3180-5 CACNA1H TSR3 MAPK8IP3 SOX8 MIR3178 FBXL16 MIR5587 NTN3 FAM234A TMEM204 HAGH MSLN LOC107987233 C1QTNF8 SSTR5-AS1 HBQ1 MIR3176 GFER ZNF598 BRICD5 PDIA2 SYNGR3 AMDHD2 MCRIP2 EME2 FAHD1 LOC105371047 RAB26 SNRNP25 PRR35 MIR6511B1 RPL3L TPSD1 PRR25 LOC106660606 MEIOB PRSS29P LOC100287175 NOXO1 LINC00254 MIR4516 RPUSD1 LOC101929280 ABCA3 TRAF7 JMJD8 CRAMP1 LOC107984876 HBM NME3 NDUFB10 CCDC154 LOC729652 GNPTG ERVK13-1 LOC105371038 LINC00235 CEMP1 TELO2 WDR90 AXIN1 MIR940 RHOT2 TMEM8A HBA2 LOC100134368 E4F1 SPSB3 RGS11 SLC9A3R2 C16orf59 WDR24 HBZ PRSS27 MPG ATP6V0C LOC105371049
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss HAGHL NHLRC4 RPUSD1 LOC101929280 GNG13 JMJD8 FAM173A METRN LOC105371038 FBXL16 MIR5587 PIGQ LINC00235 MIR662 MSLN WFIKKN1 STUB1 LOC107987233 CHTF18 WDR90 METTL26 RHBDL1 RHOT2 NARFL MIR3176 MCRIP2 WDR24 RAB11FIP3 PRR35 CCDC78 PRR25 CAPN15 RAB40C LOC105371184 LOC100287175
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss HAGHL NHLRC4 RPUSD1 LOC101929280 GNG13 JMJD8 FAM173A METRN LOC105371038 FBXL16 MIR5587 PIGQ LINC00235 MIR662 MSLN WFIKKN1 STUB1 LOC107987233 CHTF18 WDR90 METTL26 RHBDL1 RHOT2 NARFL MIR3176 MCRIP2 WDR24 RAB11FIP3 PRR35 CCDC78 PRR25 CAPN15 RAB40C LOC105371184 LOC100287175
esv3570042 Chr.16:793849 - 822928 on Build GRCh38 Gain CHTF18 GNG13 PRR25
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion HAGHL NHLRC4 RPUSD1 LOC101929280 GNG13 LMF1-AS1 JMJD8 LOC107984876 FAM173A METRN SOX8 LOC105371038 FBXL16 MIR5587 PIGQ LINC00235 MIR662 LMF1 MSLN WFIKKN1 STUB1 LOC107987233 C1QTNF8 CHTF18 WDR90 METTL26 RHBDL1 RHOT2 SSTR5 NARFL SSTR5-AS1 MIR3176 MCRIP2 WDR24 RAB11FIP3 PRR35 CCDC78 PRR25 CAPN15 RAB40C LOC105371184 LOC100287175
nsv571042 Chr.16:785298 - 847566 on Build GRCh38 Loss CHTF18 RPUSD1 GNG13 PRR25
nsv571044 Chr.16:790409 - 796798 on Build GRCh38 Loss CHTF18
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication HAGHL RPUSD1 LOC101929280 GNG13 JMJD8 FAM173A METRN LOC105371038 FBXL16 PIGQ MIR662 MSLN WFIKKN1 STUB1 CHTF18 WDR90 METTL26 RHBDL1 RHOT2 NARFL MCRIP2 WDR24 CCDC78 RAB40C LOC105371184 LOC100287175
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication HAGHL NHLRC4 RPUSD1 LOC101929280 GNG13 JMJD8 FAM173A METRN LOC105371038 FBXL16 MIR5587 PIGQ LINC00235 MIR662 MSLN WFIKKN1 STUB1 LOC107987233 CHTF18 WDR90 METTL26 RHBDL1 RHOT2 NARFL MIR3176 MCRIP2 WDR24 RAB11FIP3 PRR35 CCDC78 PRR25 CAPN15 RAB40C LOC105371184 LOC100287175
nsv571043 Chr.16:787857 - 798755 on Build GRCh38 Loss CHTF18 RPUSD1 GNG13
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss CHTF18 RPUSD1 GNG13 PRR25
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss HAGHL CHTF18 WDR90 RPUSD1 RHBDL1 RHOT2 GNG13 JMJD8 NARFL FAM173A METRN MCRIP2 LOC105371038 WDR24 FBXL16 CCDC78 MIR662 MSLN STUB1 LOC105371184 LOC100287175
nsv571045 Chr.16:790597 - 847566 on Build GRCh38 Gain CHTF18 GNG13 PRR25
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss CHTF18 RPUSD1 MIR662 MSLN

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