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Gene Symbol
TAP1
Assay Reference Genome
Location

Chr.6:32848839 on build GRCh38
Cytoband
6p21.32
Assay ID Hs01920175_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6890

Gene Name:

 transporter 1, ATP binding cassette subfamily B member

Gene Aliases:

 ABC17, ABCB2, APT1, D6S114E, PSF-1, PSF1, RING4, TAP1*0102N, TAP1N

Location:

 Chr.6:32845209-32853971 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAP1 NM_000593.5 NP_000584.2
NM_001292022.1 NP_001278951.1
AB012644.1 BAA32813.1
AK123494.1 1 1304
AK130176.1
AK302340.1
AK313762.1
AY523970.1 AAS55411.1
AY523971.2 AAS55412.1
BC014081.2 AAH14081.1
BX648013.1
KU178346.1
KU178347.1
L21204.1 AAC12902.1
L21205.1 AAC12903.1
L21206.1 AAC12904.1
L21207.1 AAC12905.1
L21208.1 AAC12906.1
X57521.1 CAA40740.1
X57522.1 CAA40741.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion MIR6721 TNF AIF1 MIR5004 CYP21A2 HLA-DQB1 MIR219A1 PRRC2A HSPA1L ATP6V1G2 DXO HCP5 SYNGAP1 PPT2-EGFL8 SLC44A4 NEU1 DAXX MICB GPANK1 MIR3135B HCG25 SNORD52 MIR6873 DDAH2 SAPCD1-AS1 APOM PRRT1 PSMB8-AS1 CSNK2B HLA-DMA LY6G6F MSH5 HLA-DQB2 HLA-DOA ZBTB9 BAG6 SNORA38 LTB LOC100507547 VWA7 VPS52 ZBTB22 STK19 EHMT2 RING1 AGER LY6G5C RPS18 PHF1 PFDN6 WDR46 HLA-DRA NCR3 SKIV2L B3GALT4 C6orf25 PPP1R2P1 SNORD84 SLC39A7 ABHD16A HLA-DQA1 DDX39B-AS1 NFKBIL1 VARS TNXB HLA-DQB1-AS1 HSPA1B ATF6B C2-AS1 HLA-DRB1 RNF5 HLA-DMB PPT2 RGL2 PBX2 C4B HCG23 HSD17B8 HCG24 CUTA TAP2 HSPA1A HLA-DPB2 MIR6833 LY6G6D SAPCD1 C6orf47 TAP1 LOC100294145 KIFC1 ZBTB12 MIR6834 TNXA HLA-DPB1 C2 CYP21A1P C6orf48 HLA-DRB5 LOC100287329 C6orf10 AGPAT1 GPSM3 BTNL2 LTA C4A LSM2 ATP6V1G2-DDX39B NELFE RXRB MIR1236 HCG26 SNORD117 HLA-DOB PSMB9 LOC102725068 CLIC1 BRD2 HLA-DRB6 MIR4646 FKBPL LY6G6C EGFL8 COL11A2 LOC101929163 DDX39B LY6G6E HLA-DQA2 MIR6832 CFB PSMB8 HLA-DPA1 MCCD1 LST1 LY6G5B TAPBP NOTCH4 SNORD48 MSH5-SAPCD1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion MIR6721 TNF AIF1 MIR5004 CYP21A2 HLA-DQB1 MIR219A1 PRRC2A HSPA1L ATP6V1G2 DXO HCP5 SYNGAP1 PPT2-EGFL8 SLC44A4 NEU1 DAXX MICB GPANK1 MIR3135B HCG25 SNORD52 MIR6873 DDAH2 SAPCD1-AS1 APOM PRRT1 PSMB8-AS1 CSNK2B HLA-DMA LY6G6F MSH5 HLA-DQB2 HLA-DOA ZBTB9 BAG6 SNORA38 LTB LOC100507547 VWA7 VPS52 ZBTB22 STK19 EHMT2 RING1 AGER LY6G5C RPS18 PHF1 PFDN6 WDR46 HLA-DRA NCR3 SKIV2L B3GALT4 C6orf25 PPP1R2P1 SNORD84 SLC39A7 ABHD16A HLA-DQA1 DDX39B-AS1 NFKBIL1 VARS TNXB HLA-DQB1-AS1 HSPA1B ATF6B C2-AS1 HLA-DRB1 RNF5 HLA-DMB PPT2 RGL2 PBX2 C4B HCG23 HSD17B8 HCG24 CUTA TAP2 HSPA1A HLA-DPB2 MIR6833 LY6G6D SAPCD1 C6orf47 TAP1 LOC100294145 KIFC1 ZBTB12 MIR6834 TNXA HLA-DPB1 C2 CYP21A1P C6orf48 HLA-DRB5 LOC100287329 C6orf10 AGPAT1 GPSM3 BTNL2 LTA C4A LSM2 ATP6V1G2-DDX39B NELFE RXRB MIR1236 HCG26 SNORD117 HLA-DOB PSMB9 LOC102725068 CLIC1 BRD2 HLA-DRB6 MIR4646 FKBPL LY6G6C EGFL8 COL11A2 LOC101929163 DDX39B LY6G6E HLA-DQA2 MIR6832 CFB PSMB8 HLA-DPA1 MCCD1 LST1 LY6G5B TAPBP NOTCH4 SNORD48 MSH5-SAPCD1
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss PSMB8-AS1 TAP1 LOC100294145 HLA-DMA PPP1R2P1 PSMB9 PSMB8 HLA-DMB TAP2 BRD2
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion PSMB8-AS1 HCG24 HLA-DOB HLA-DMA PSMB9 MIR5004 CUTA TAP2 BRD2 HLA-DQB1 HLA-DQB2 HLA-DOA ZBTB9 HLA-DPB2 MIR219A1 VPS52 TAP1 LOC100294145 ZBTB22 RING1 KIFC1 COL11A2 MIR6834 SYNGAP1 RPS18 PHF1 PFDN6 WDR46 B3GALT4 DAXX HLA-DQA2 PPP1R2P1 HLA-DPB1 SLC39A7 PSMB8 HLA-DQA1 HLA-DPA1 HLA-DQB1-AS1 MIR3135B HCG25 MIR6873 TAPBP HLA-DMB RGL2 RXRB HSD17B8

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