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Gene Symbol
TAP1
Assay Reference Genome
Location

Chr.6:32848839 on build GRCh38
Cytoband
6p21.32
Assay ID Hs01920175_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6890

Gene Name:

 transporter 1, ATP binding cassette subfamily B member

Gene Aliases:

 ABC17, ABCB2, APT1, D6S114E, PSF-1, PSF1, RING4, TAP1*0102N, TAP1N

Location:

 Chr.6:32845209-32853971 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAP1 NM_000593.5 NP_000584.2
NM_001292022.1 NP_001278951.1
AB012644.1 BAA32813.1
AK123494.1 1 1304
AK130176.1
AK302340.1
AK313762.1
AY523970.1 AAS55411.1
AY523971.2 AAS55412.1
BC014081.2 AAH14081.1
BX648013.1
KU178346.1
KU178347.1
L21204.1 AAC12902.1
L21205.1 AAC12903.1
L21206.1 AAC12904.1
L21207.1 AAC12905.1
L21208.1 AAC12906.1
X57521.1 CAA40740.1
X57522.1 CAA40741.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion NELFE MSH5 MIR3135B C2-AS1 AIF1 WDR46 B3GALT4 SYNGAP1 HLA-DPB1 ATP6V1G2-DDX39B PPT2 APOM MIR6721 BRD2 DAXX PBX2 MCCD1 HSPA1A LST1 NFKBIL1 ATF6B LTA DDAH2 ATP6V1G2 EGFL8 NOTCH4 SLC39A7 PHF1 HLA-DQA2 MIR6873 NEU1 ZBTB9 HLA-DMA EHMT2 TAP1 ZBTB12 HCG25 LOC100287329 SLC44A4 PPT2-EGFL8 MIR5004 MIR6834 MIR6832 C6orf10 SNORA38 HLA-DRB5 C2 C6orf48 LY6G5B SNORD84 HLA-DQB2 HLA-DRB1 PSMB8 SAPCD1 LOC102725068 SNORD117 RGL2 HLA-DMB AGPAT1 HCP5 TAPBP MIR4646 RNF5 LSM2 HLA-DRA C6orf47 TAP2 LY6G6C VPS52 TNXA HLA-DQA1 TNXB TNF PFDN6 GPANK1 ABHD16A C4A PRRC2A HLA-DQB1 RXRB HCG24 DXO PRRT1 RING1 CYP21A2 LY6G6F DDX39B-AS1 NCR3 SAPCD1-AS1 HLA-DRB6 MIR6833 FKBPL CSNK2B LY6G6D MIR1236 CYP21A1P LTB CUTA C6orf25 HSPA1B BTNL2 SKIV2L MICB DDX39B LY6G5C SNORD52 HLA-DPA1 ZBTB22 VWA7 COL11A2 SNORD48 C4B BAG6 MIR219A1 RPS18 HCG23 LOC101929163 VARS PSMB9 MSH5-SAPCD1 LOC100507547 HLA-DQB1-AS1 HSPA1L LOC100294145 STK19 PPP1R2P1 HLA-DPB2 LY6G6E PSMB8-AS1 CFB CLIC1 KIFC1 HLA-DOB AGER HLA-DOA HCG26 GPSM3 HSD17B8
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion NELFE MSH5 MIR3135B C2-AS1 AIF1 WDR46 B3GALT4 SYNGAP1 HLA-DPB1 ATP6V1G2-DDX39B PPT2 APOM MIR6721 BRD2 DAXX PBX2 MCCD1 HSPA1A LST1 NFKBIL1 ATF6B LTA DDAH2 ATP6V1G2 EGFL8 NOTCH4 SLC39A7 PHF1 HLA-DQA2 MIR6873 NEU1 ZBTB9 HLA-DMA EHMT2 TAP1 ZBTB12 HCG25 LOC100287329 SLC44A4 PPT2-EGFL8 MIR5004 MIR6834 MIR6832 C6orf10 SNORA38 HLA-DRB5 C2 C6orf48 LY6G5B SNORD84 HLA-DQB2 HLA-DRB1 PSMB8 SAPCD1 LOC102725068 SNORD117 RGL2 HLA-DMB AGPAT1 HCP5 TAPBP MIR4646 RNF5 LSM2 HLA-DRA C6orf47 TAP2 LY6G6C VPS52 TNXA HLA-DQA1 TNXB TNF PFDN6 GPANK1 ABHD16A C4A PRRC2A HLA-DQB1 RXRB HCG24 DXO PRRT1 RING1 CYP21A2 LY6G6F DDX39B-AS1 NCR3 SAPCD1-AS1 HLA-DRB6 MIR6833 FKBPL CSNK2B LY6G6D MIR1236 CYP21A1P LTB CUTA C6orf25 HSPA1B BTNL2 SKIV2L MICB DDX39B LY6G5C SNORD52 HLA-DPA1 ZBTB22 VWA7 COL11A2 SNORD48 C4B BAG6 MIR219A1 RPS18 HCG23 LOC101929163 VARS PSMB9 MSH5-SAPCD1 LOC100507547 HLA-DQB1-AS1 HSPA1L LOC100294145 STK19 PPP1R2P1 HLA-DPB2 LY6G6E PSMB8-AS1 CFB CLIC1 KIFC1 HLA-DOB AGER HLA-DOA HCG26 GPSM3 HSD17B8
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion PFDN6 MIR6834 MIR3135B HLA-DPA1 ZBTB22 WDR46 COL11A2 HLA-DQB1 B3GALT4 SYNGAP1 HLA-DPB1 RXRB HCG24 MIR219A1 RPS18 RING1 BRD2 DAXX HLA-DQB2 PSMB8 RGL2 HLA-DMB PSMB9 HLA-DQB1-AS1 TAPBP LOC100294145 SLC39A7 PPP1R2P1 PHF1 HLA-DQA2 MIR6873 HLA-DPB2 CUTA PSMB8-AS1 TAP2 ZBTB9 HLA-DMA KIFC1 TAP1 VPS52 HLA-DOB HLA-DQA1 HCG25 HLA-DOA HSD17B8 MIR5004
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss HLA-DMB PSMB9 PSMB8-AS1 TAP2 HLA-DMA TAP1 LOC100294145 BRD2 PSMB8 PPP1R2P1

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