Genomic Map
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Target Gene Details
Entrez Gene ID: | 54795 |
Gene Name: | transient receptor potential cation channel subfamily M member 4 |
Gene Aliases: |
LTrpC4, PFHB1B, TRPM4B, hTRPM4 |
Location: |
Chr.19:49157741-49211841 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TRPM4 | NM_001195227.1 | 6 | 798 | NP_001182156.1 |
| NM_001321281.1 | 4 | 471 | NP_001308210.1 | |
| NM_001321282.1 | 5 | 635 | NP_001308211.1 | |
| NM_001321283.1 | 4 | 460 | NP_001308212.1 | |
| NM_001321285.1 | 3 | 296 | NP_001308214.1 | |
| NM_017636.3 | 6 | 798 | NP_060106.2 | |
| XM_005259017.1 | XP_005259074.1 | |||
| AF497623.1 | 6 | 762 | AAM18083.1 | |
| AJ575813.1 | 6 | 731 | CAE05941.1 | |
| AK000048.1 | 4 | 491 | BAA90907.1 | |
| AK292862.1 | 6 | 751 | ||
| AK295820.1 | 3 | 195 | ||
| AK307897.1 | 4 | 471 | ||
| AY046396.1 | 4 | 390 | AAL02142.1 | |
| AY297044.1 | 4 | 386 | AAP44473.1 | |
| AY297045.1 | 6 | 742 | AAP44474.1 | |
| AY297046.1 | 6 | 742 | AAP44475.1 | |
| BC132727.1 | 6 | 725 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833859 | Chr.19:48997009 - 49173266 on Build GRCh38 | Loss |
 CGB2
NTF4
CGB5
LIN7B
KCNA7
LHB
C19orf73
SNAR-G2
SNRNP70
CGB3
CGB7
HRC
RUVBL2
LOC101059948
TRPM4
SNAR-G1
PPFIA3
MIR6798
CGB8
CGB1
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
PLA2G4C
SNORD32A
AKT1S1
PTOV1-AS1
IL4I1
NUCB1
SNAR-C2
KCNA7
PRR12
RRAS
GRWD1
MAMSTR
SCAF1
ZNF473
PTOV1-AS2
SEC1P
PTOV1
RUVBL2
CD37
MED25
FLT3LG
SPACA4
FUT1
MIR150
SNAR-A11
FAM83E
CGB2
HSD17B14
SNAR-A1
CGB5
IZUMO1
PRMT1
CCDC114
C19orf73
SNRNP70
MIR4749
CGB7
SLC6A16
RPL18
GRIN2D
BCAT2
SNAR-B2
TRPM4
CGB8
FLJ26850
CGB1
NTF4
GFY
NTN5
KCNJ14
LIN7B
BAX
CPT1C
SNAR-A6
LHB
ZNF114
CYTH2
SNAR-A4
SNAR-A9
RASIP1
RPS11
SNAR-A10
SLC17A7
ATF5
SIGLEC16
ELSPBP1
MIR4750
SNAR-A12
ALDH16A1
C19orf68
LOC100287477
FCGRT
LMTK3
SNAR-A14
SYNGR4
SULT2B1
SNAR-C5
LOC105372430
MIR6800
CARD8-AS1
MIR6799
SNORD35A
MIR6798
SNAR-A13
SNORD35B
DKKL1
RPL13A
CA11
DHDH
MIR4324
SNAR-A8
SNAR-A3
SNAR-A2
CARD8
FUZ
HRC
SNAR-C3
PPFIA3
TMEM143
PTH2
CABP5
LIG1
SNAR-G2
SNAR-B1
CGB3
FUT2
SNORD33
PNKP
VRK3
ADM5
PRRG2
PIH1D1
SNAR-G1
NOSIP
IRF3
SIGLEC11
SNORD34
LOC101928295
SNAR-A5
BCL2L12
SNAR-C4
GYS1
SPHK2
TSKS
LOC101059948
SNAR-C1
FTL
NUP62
NUCB1-AS1
MIR5088
MIR4751
AP2A1
SNAR-A7
TEAD2
EMP3
LOC105447645
CCDC155
PPP1R15A
TULP2
SNAR-D
RCN3
PLA2G4C-AS1
KDELR1
PLEKHA4
BSPH1
TBC1D17
DBP
FGF21
|
| dgv1057e212 | Chr.19:49165806 - 49183334 on Build GRCh38 | Loss |
TRPM4
|
| nsv1060108 | Chr.19:49118098 - 49183334 on Build GRCh38 | Gain |
HRC
LIN7B
C19orf73
TRPM4
PPFIA3
|
| esv2760526 | Chr.19:49115521 - 49170761 on Build GRCh38 | Gain |
HRC
LIN7B
C19orf73
TRPM4
PPFIA3
|
| dgv667e214 | Chr.19:49130606 - 49174364 on Build GRCh38 | Gain |
HRC
TRPM4
PPFIA3
|
| esv999596 | Chr.19:49168510 - 49169556 on Build GRCh38 | Insertion |
TRPM4
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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