Genomic Map
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Target Gene Details
Entrez Gene ID: | 54795 |
Gene Name: | transient receptor potential cation channel subfamily M member 4 |
Gene Aliases: |
LTrpC4, PFHB1B, TRPM4B, hTRPM4 |
Location: |
Chr.19:49157741-49211841 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TRPM4 | NM_001195227.1 | 6 | 798 | NP_001182156.1 |
| NM_001321281.1 | 4 | 471 | NP_001308210.1 | |
| NM_001321282.1 | 5 | 635 | NP_001308211.1 | |
| NM_001321283.1 | 4 | 460 | NP_001308212.1 | |
| NM_001321285.1 | 3 | 296 | NP_001308214.1 | |
| NM_017636.3 | 6 | 798 | NP_060106.2 | |
| XM_005259017.1 | XP_005259074.1 | |||
| AF497623.1 | 6 | 762 | AAM18083.1 | |
| AJ575813.1 | 6 | 731 | CAE05941.1 | |
| AK000048.1 | 4 | 491 | BAA90907.1 | |
| AK292862.1 | 6 | 751 | ||
| AK295820.1 | 3 | 195 | ||
| AK307897.1 | 4 | 471 | ||
| AY046396.1 | 4 | 390 | AAL02142.1 | |
| AY297044.1 | 4 | 386 | AAP44473.1 | |
| AY297045.1 | 6 | 742 | AAP44474.1 | |
| AY297046.1 | 6 | 742 | AAP44475.1 | |
| BC132727.1 | 6 | 725 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833859 | Chr.19:48997009 - 49173266 on Build GRCh38 | Loss |
 SNRNP70
SNAR-G2
PPFIA3
CGB1
KCNA7
RUVBL2
HRC
TRPM4
LIN7B
CGB8
CGB2
NTF4
CGB3
LHB
MIR6798
SNAR-G1
CGB5
CGB7
LOC101059948
C19orf73
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
RASIP1
MIR6799
SNAR-D
CGB1
TULP2
SLC6A16
TBC1D17
GFY
CYTH2
VRK3
SNAR-C4
IRF3
NTF4
CGB3
MIR4324
NUCB1
LHB
SNORD33
CARD8
SNAR-A12
FAM83E
TMEM143
RPS11
ELSPBP1
PRRG2
DKKL1
SNAR-G2
C19orf68
FUT2
SNAR-A1
SNAR-A4
KDELR1
SNORD35A
CCDC114
MIR4751
GRWD1
LOC100287477
SNAR-B1
DHDH
MAMSTR
SNAR-B2
TEAD2
SIGLEC11
SNAR-C2
TSKS
SNAR-C3
NUCB1-AS1
CCDC155
CGB8
GRIN2D
ZNF114
SYNGR4
PNKP
PTOV1-AS2
CA11
GYS1
MIR150
CGB5
CGB7
CD37
SPHK2
SEC1P
SPACA4
SNAR-A5
C19orf73
RCN3
SNRNP70
SNORD35B
NTN5
ZNF473
TRPM4
LIN7B
BSPH1
NOSIP
RRAS
IZUMO1
FLJ26850
MIR6798
LOC105372430
LOC101059948
IL4I1
PLEKHA4
EMP3
FUZ
SNAR-C1
KCNA7
HRC
SNORD32A
SNAR-A6
MIR6800
SNAR-A9
ATF5
ALDH16A1
CABP5
CPT1C
KCNJ14
MIR4750
SNAR-A8
SNORD34
FUT1
PLA2G4C
BCL2L12
FCGRT
RUVBL2
MIR5088
PTH2
PIH1D1
LIG1
FGF21
FLT3LG
SNAR-A10
LOC105447645
BAX
PPFIA3
LMTK3
PRR12
SNAR-A14
PTOV1
SNAR-G1
MED25
SNAR-A2
PLA2G4C-AS1
RPL18
SIGLEC16
SLC17A7
SNAR-A11
LOC101928295
SCAF1
PTOV1-AS1
SNAR-A7
PRMT1
AKT1S1
HSD17B14
SNAR-C5
PPP1R15A
BCAT2
DBP
FTL
CARD8-AS1
AP2A1
CGB2
SULT2B1
RPL13A
SNAR-A13
SNAR-A3
ADM5
NUP62
MIR4749
|
| nsv1060108 | Chr.19:49118098 - 49183334 on Build GRCh38 | Gain |
PPFIA3
HRC
TRPM4
LIN7B
C19orf73
|
| dgv1057e212 | Chr.19:49165806 - 49183334 on Build GRCh38 | Loss |
TRPM4
|
| esv2760526 | Chr.19:49115521 - 49170761 on Build GRCh38 | Gain |
PPFIA3
HRC
TRPM4
LIN7B
C19orf73
|
| dgv667e214 | Chr.19:49130606 - 49174364 on Build GRCh38 | Gain |
PPFIA3
HRC
TRPM4
|
| esv999596 | Chr.19:49168510 - 49169556 on Build GRCh38 | Insertion |
TRPM4
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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