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See other CHTF18 CNV Assays ›
Gene Symbol
CHTF18
Assay Reference Genome
Location

Chr.16:796735 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01931098_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63922

Gene Name:

 chromosome transmission fidelity factor 18

Gene Aliases:

 C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL

Location:

 Chr.16:788622-798074 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 17 - Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHTF18 NM_022092.2 NP_071375.1
XM_005255470.1 XP_005255527.1
XM_005255471.3 XP_005255528.1
XM_011522572.1 XP_011520874.1
XM_011522573.1 XP_011520875.1
XM_017023532.1 XP_016879021.1
XM_017023533.1 XP_016879022.1
XM_017023534.1 XP_016879023.1
AK024476.1 BAB15766.1
AK128869.1
BC006278.2 AAH06278.2
BC006437.1 AAH06437.1
BC018184.1 AAH18184.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain CHTF18 MSLN GNG13 RPUSD1 MIR662 PRR25
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain CHTF18 MSLN GNG13 RPUSD1 MIR662 PRR25
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NPW MIR3176 CAPN15 SLC9A3R2 CEMP1 ARHGDIG MIR6768 ERVK13-1 AMDHD2 MSRB1 NPRL3 TPSB2 RAB26 LOC107984876 SNHG19 BRICD5 TBC1D24 RGS11 SSTR5 PRR35 PDIA2 MCRIP2 WASIR2 CCDC154 SNORA64 PKD1 POLR3K CCNF RNPS1 LMF1-AS1 RPUSD1 RHOT2 MIR1225 PRSS29P LOC105371047 LOC107987233 MIR3180-5 HBA1 TPSG1 GFER RAB40C LOC729652 NME3 PTX4 SNRNP25 DECR2 FLJ42627 FAM234A TELO2 SOX8 UBE2I TPSD1 JMJD8 PRSS27 E4F1 MRPS34 C1QTNF8 RNF151 PRR25 RPL3L MIR6767 NUBP2 SPSB3 RHBDL1 NARFL CASKIN1 MIR662 MIR6511B1 HAGHL MIR940 WDR24 DNASE1L2 LOC652276 ZNF598 HN1L MIR6859-4 RPL23AP5 MIR3178 MIR4717 GNPTG SNHG9 UNKL LOC100134368 HBZ CCDC78 MSLN NTN3 FAM173A HBM MIR3677 MIR4516 TSC2 WFIKKN1 RPS2 ATP6V0C LOC105371038 LOC105371184 MAPK8IP3 CACNA1H LOC106660606 NME4 SSTR5-AS1 TBL3 EME2 WDR90 ABCA3 METRN HBQ1 TRAF7 LUC7L LOC105371049 METTL26 PDPK1 TMEM8A CRAMP1 C16orf91 TSR3 SNORA78 SYNGR3 IFT140 BAIAP3 AXIN1 HBA2 NOXO1 LOC105371046 ECI1 FAHD1 KCTD5 LOC101929280 MLST8 MIR3177 MPG SNORD60 RHBDF1 IGFALS LMF1 GNG13 STUB1 TPSAB1 MEIOB DDX11L10 MIR5587 LINC00235 HAGH CHTF18 LINC00254 PIGQ CLCN7 RAB11FIP3 NDUFB10 HS3ST6 NHLRC4 C16orf59 LOC105371045 FBXL16 MRPL28 ABCA17P LOC100287175 NTHL1 TMEM204 PGP SNORA10
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss MIR3176 CAPN15 RAB40C CCDC78 MSLN FAM173A LOC101929280 WFIKKN1 JMJD8 GNG13 STUB1 LOC105371038 LOC105371184 PRR25 MIR5587 LINC00235 PRR35 WDR90 CHTF18 MCRIP2 RHBDL1 PIGQ NARFL MIR662 RAB11FIP3 METRN HAGHL WDR24 NHLRC4 METTL26 FBXL16 LOC100287175 RPUSD1 RHOT2 LOC107987233
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss MIR3176 CAPN15 RAB40C CCDC78 MSLN FAM173A LOC101929280 WFIKKN1 JMJD8 GNG13 STUB1 LOC105371038 LOC105371184 PRR25 MIR5587 LINC00235 PRR35 WDR90 CHTF18 MCRIP2 RHBDL1 PIGQ NARFL MIR662 RAB11FIP3 METRN HAGHL WDR24 NHLRC4 METTL26 FBXL16 LOC100287175 RPUSD1 RHOT2 LOC107987233
esv3570042 Chr.16:793849 - 822928 on Build GRCh38 Gain CHTF18 GNG13 PRR25
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion MIR3176 CAPN15 RAB40C CCDC78 MSLN FAM173A LOC101929280 LOC107984876 SOX8 WFIKKN1 JMJD8 LMF1 GNG13 STUB1 C1QTNF8 LOC105371038 LOC105371184 PRR25 MIR5587 SSTR5 LINC00235 PRR35 SSTR5-AS1 WDR90 CHTF18 MCRIP2 RHBDL1 PIGQ NARFL MIR662 RAB11FIP3 METRN HAGHL WDR24 NHLRC4 METTL26 FBXL16 LOC100287175 LMF1-AS1 RPUSD1 RHOT2 LOC107987233
nsv571042 Chr.16:785298 - 847566 on Build GRCh38 Loss CHTF18 GNG13 RPUSD1 PRR25
nsv571044 Chr.16:790409 - 796798 on Build GRCh38 Loss CHTF18
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RAB40C CCDC78 MSLN FAM173A LOC101929280 WFIKKN1 JMJD8 GNG13 STUB1 LOC105371038 LOC105371184 WDR90 CHTF18 MCRIP2 RHBDL1 PIGQ NARFL MIR662 METRN HAGHL WDR24 METTL26 FBXL16 LOC100287175 RPUSD1 RHOT2
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication MIR3176 CAPN15 RAB40C CCDC78 MSLN FAM173A LOC101929280 WFIKKN1 JMJD8 GNG13 STUB1 LOC105371038 LOC105371184 PRR25 MIR5587 LINC00235 PRR35 WDR90 CHTF18 MCRIP2 RHBDL1 PIGQ NARFL MIR662 RAB11FIP3 METRN HAGHL WDR24 NHLRC4 METTL26 FBXL16 LOC100287175 RPUSD1 RHOT2 LOC107987233
nsv571043 Chr.16:787857 - 798755 on Build GRCh38 Loss CHTF18 GNG13 RPUSD1
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss CHTF18 GNG13 RPUSD1 PRR25
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss WDR90 CHTF18 MCRIP2 CCDC78 RHBDL1 MSLN NARFL FAM173A MIR662 METRN HAGHL WDR24 JMJD8 FBXL16 GNG13 LOC100287175 STUB1 RPUSD1 RHOT2 LOC105371038 LOC105371184
nsv571045 Chr.16:790597 - 847566 on Build GRCh38 Gain CHTF18 GNG13 PRR25
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss CHTF18 MSLN RPUSD1 MIR662

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