accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other LIME1 CNV Assays ›
Gene Symbol
LIME1
Assay Reference Genome
Location

Chr.20:63738246 on build GRCh38
Cytoband
20q13.33
Assay ID Hs01941812_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 54923

Gene Name:

 Lck interacting transmembrane adaptor 1

Gene Aliases:

 LIME, dJ583P15.4

Location:

 Chr.20:63735701-63739107 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LIME1 NM_001305654.1 5 800 NP_001292583.1
NM_001305655.1 5 567 NP_001292584.1
NM_017806.3 5 602 NP_060276.2
AK000413.1 5 419 BAA91148.1
AK054722.1 3 1651
AY203957.1 5 800 AAP34480.1
BC017016.1 5 367 AAH17016.1
BP368475.1 5 436

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2722959 Chr.20:63715664 - 63806918 on Build GRCh38 Deletion ZGPAT LIME1 SLC2A4RG ZBTB46
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion ARFRP1 ZBTB46-AS1 ZGPAT LIME1 TNFRSF6B RTEL1-TNFRSF6B SLC2A4RG RTEL1 ZBTB46 STMN3
nsv586615 Chr.20:63734204 - 63741603 on Build GRCh38 Gain ZGPAT LIME1 SLC2A4RG
nsv586614 Chr.20:63725275 - 63741460 on Build GRCh38 Gain ZGPAT LIME1 SLC2A4RG
dgv7677n54 Chr.20:63736025 - 63738644 on Build GRCh38 Loss ZGPAT LIME1
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion ARFRP1 ZGPAT LIME1 TNFRSF6B RTEL1-TNFRSF6B SLC2A4RG RTEL1 ZBTB46 STMN3
esv7227 Chr.20:63715550 - 63807161 on Build GRCh38 Loss ZGPAT LIME1 SLC2A4RG ZBTB46
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss NPBWR2 ZBTB46-AS1 PCMTD2 TCEA2 MIR941-4 DNAJC5 LOC100505771 OPRL1 UCKL1 ABHD16B MIR647 RTEL1-TNFRSF6B MIR6813 RTEL1 C20orf181 PRPF6 LINC00266-1 TPD52L2 MYT1 MIR941-3 ARFRP1 MIR941-5 MIR941-2 ZNF512B MIR1914 LINC00176 RGS19 ZGPAT LIME1 UCKL1-AS1 MIR941-1 SOX18 TNFRSF6B GMEB2 SLC2A4RG ZBTB46 LKAAEAR1 SAMD10 STMN3
nsv1059142 Chr.20:63731978 - 63798885 on Build GRCh38 Gain ZGPAT LIME1 SLC2A4RG ZBTB46
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss ARFRP1 FNDC11 EEF1A2 PTK6 SRMS LOC100505771 ZGPAT PPDPF HELZ2 LIME1 TNFRSF6B RTEL1-TNFRSF6B GMEB2 SLC2A4RG RTEL1 ZBTB46 STMN3
dgv7681n54 Chr.20:63737667 - 63739379 on Build GRCh38 Loss LIME1
esv29394 Chr.20:63737285 - 63740490 on Build GRCh38 Loss LIME1 SLC2A4RG
dgv7678n54 Chr.20:63737451 - 63739060 on Build GRCh38 Loss LIME1
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss ARFRP1 FNDC11 EEF1A2 PTK6 SRMS LOC100505771 ZGPAT PPDPF HELZ2 LIME1 TNFRSF6B RTEL1-TNFRSF6B GMEB2 SLC2A4RG RTEL1 KCNQ2 ZBTB46 STMN3

Back To Top

More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s)


Back To Top

Related Products