Hs01941947_cn

• Gene Symbol: SLC38A10
• Assay Reference Genome Location: Chr.17:81245363 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124565
• Gene Name: solute carrier family 38 member 10
• Gene Aliases: PP1744
• Location: Chr.17:81244811-81295433 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A10	NM_001037984.2	16	3971	NP_001033073.1
	XM_005257019.1	17	4089	XP_005257076.1
	XM_011524288.1	17	4110	XP_011522590.1
	XM_011524289.1	16	4086	XP_011522591.1
	XM_011524290.1	15	3365	XP_011522592.1
	AF086389.1	1	73
	AI476273.1
	BI194553.1	1	732
	BM129331.1
	CA447446.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2161	Chr.17:81238081 - 81282084 on Build GRCh38	Insertion	SLC38A10 TEPSIN C17orf89
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	LOC400627 SLC25A10 LOC105371921 LOC101928855 FAAP100 MRPL12 SLC38A10 BAHCC1 CCDC137 LOC107985021 MIR4740 MIR1250 LOC107985022 AATK-AS1 RPTOR OXLD1 BAIAP2 TMEM105 AATK LOC105371925 LINC00482 ARL16 LOC100129503 TSPAN10 NPLOC4 MIR6786 ACTG1 LOC100130370 MIR657 CEP131 MIR3065 PDE6G MIR3186 FSCN2 MIR338 CHMP6 TEPSIN BAIAP2-AS1 C17orf89 HGS
esv3893051	Chr.17:81244320 - 81272804 on Build GRCh38	Gain	SLC38A10
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	FAAP100 TBCD MRPL12 SLC38A10 BAHCC1 CCDC137 WDR45B MYADML2 LOC105376791 MIR4740 NOTUM MIR6787 FOXK2 ARHGDIA C17orf62 ZNF750 SLC16A3 FN3KRP AATK ARL16 ALYREF NPLOC4 CCDC57 MIR6786 MIR3186 ANAPC11 FASN FSCN2 LOC105376790 NPB GCGR HEXDC MIR4525 C17orf89 HGS SLC25A10 GPS1 UTS2R LRRC45 LOC101929552 MAFG-AS1 OGFOD3 RAC3 DUS1L DCXR MCRIP1 AATK-AS1 OXLD1 RFNG TMEM105 FN3K LOC105371925 B3GNTL1 SIRT7 LINC00482 TSPAN10 ASPSCR1 P4HB ACTG1 LOC100130370 CEP131 PYCR1 TEX19 RAB40B PDE6G LOC101929511 STRA13 PPP1R27 SNORD134 LOC105371944 NARF TEPSIN SECTM1 PCYT2 MAFG CSNK1D CD7
dgv46n68	Chr.17:81133921 - 81288932 on Build GRCh38	Loss	LOC105371925 SLC38A10 AATK-AS1 CEP131 TEPSIN C17orf89 AATK
nsv457971	Chr.17:81216762 - 81282974 on Build GRCh38	Loss	LOC105371925 SLC38A10 CEP131 TEPSIN C17orf89
nsv470619	Chr.17:81032233 - 81349843 on Build GRCh38	Loss	LOC105371925 LINC00482 SLC38A10 MIR657 CEP131 MIR3065 MIR1250 AATK-AS1 MIR338 BAIAP2 TEPSIN TMEM105 BAIAP2-AS1 C17orf89 AATK
nsv1160499	Chr.17:81235307 - 81320655 on Build GRCh38	Deletion	LINC00482 SLC38A10 TEPSIN TMEM105 C17orf89
nsv1064123	Chr.17:81168449 - 81282457 on Build GRCh38	Gain	LOC105371925 SLC38A10 AATK-AS1 CEP131 TEPSIN C17orf89
nsv952389	Chr.17:81137501 - 81593774 on Build GRCh38	Deletion	LOC105371925 LINC00482 FAAP100 NPLOC4 SLC38A10 BAHCC1 ACTG1 LOC100130370 CEP131 MIR3186 MIR4740 FSCN2 AATK-AS1 TEPSIN TMEM105 C17orf89 AATK
nsv509677	Chr.17:81227139 - 81267309 on Build GRCh38	Insertion	LOC105371925 SLC38A10 TEPSIN C17orf89

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport
bone development

Function(s)

amino acid transmembrane transporter activity