Name: [Hs01948345_cn] [HCN3]
Creator: Thermo Fisher Scientific
Keywords: [HCN3] Assay, [hyperpolarization activated cyclic nucleotide gated potassium channel 3] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	57657
Gene Name:	hyperpolarization activated cyclic nucleotide gated potassium channel 3
Gene Aliases:	-
Location:	Chr.1:155277427-155289848 on Build GRCh38
Assay Gene Location:	Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HCN3	NM_020897.2	8	2345	NP_065948.1
	NR_073074.1	8	2212
	XM_011509816.2	8	2863	XP_011508118.1
	XM_011509817.2	7	2183	XP_011508119.1
	XM_011509818.2	7	1575	XP_011508120.1
	XM_017001918.1	7	1557	XP_016857407.1
	AB040968.2	8	1994	BAA96059.2
	AF488550.1	8	2189	AAO49470.1
	AK055840.1	7	2400
	AK299333.1	8	2185
	BC000066.1	7	1573	AAH00066.1
	BC028024.1	5	1210	AAH28024.2

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3032	Chr.1:155285619 - 155318185 on Build GRCh38	Insertion	FDPS LOC105371451 PKLR HCN3
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	POU5F1P4 MIR555 SCAMP3 RUSC1 FDPS ASH1L LOC105371451 CLK2 PKLR FAM189B HCN3 RUSC1-AS1
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	SNORA80E POU5F1P4 LOC100505728 YY1AP1 SCARNA26B MSTO1 LOC105371451 SCARNA26A GON4L SCARNA4 SYT11 RXFP4 RUSC1 MSTO2P CLK2 PKLR FAM189B ARHGEF2 ASH1L-AS1 RUSC1-AS1 MIR555 SCAMP3 KIAA0907 FDPS DAP3 ASH1L RIT1 HCN3
nsv436027	Chr.1:155260761 - 155291532 on Build GRCh38	Insertion	SCAMP3 CLK2 PKLR HCN3
nsv952214	Chr.1:155279610 - 155304509 on Build GRCh38	Deletion	PKLR HCN3
esv2758971	Chr.1:155122502 - 155345016 on Build GRCh38	Gain	GBAP1 TRIM46 RUSC1 MIR92B CLK2 PKLR FAM189B EFNA1 RUSC1-AS1 SCAMP3 FDPS ASH1L KRTCAP2 LOC105371451 SLC50A1 THBS3 MUC1 MTX1 DPM3 HCN3 GBA
esv23319	Chr.1:155257268 - 155292883 on Build GRCh38	Gain	SCAMP3 CLK2 PKLR HCN3