Hs01965802_cn

• Gene Symbol: CLSTN1
• Assay Reference Genome Location: Chr.1:9731815 on build GRCh38
• Cytoband: 1p36.22

Target Gene Details

• Entrez Gene ID: 22883
• Gene Name: calsyntenin 1
• Gene Aliases: ALC-ALPHA, CDHR12, CST-1, CSTN1, PIK3CD, XB31alpha, alcalpha1, alcalpha2
• Location: Chr.1:9729021-9824526 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CLSTN1	NM_001009566.2	17	3302	NP_001009566.1
	NM_001302883.1	16	3245	NP_001289812.1
	NM_014944.4	16	3272	NP_055759.3
	AB020718.1	17	3302
	AF438482.1	16	3238	AAQ04552.1
	AK000605.1	12	1912
	AK001591.1	4	580
	AK056820.1	2	168
	AK225500.1
	AK289798.1	16	2480
	AK304813.1	16	2487
	AY753301.1	16	2479	AAV30551.1
	BC033902.2	16	2730	AAH33902.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv832203	Chr.1:9666574 - 9800151 on Build GRCh38	Loss	PIK3CD-AS2 CLSTN1 PIK3CD

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

regulation of cell growth
cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
positive regulation of synaptic transmission
positive regulation of synapse assembly

Function(s)

beta-amyloid binding
calcium ion binding
protein binding
kinesin binding
X11-like protein binding