Hs01976501_cn

• Gene Symbol: MEGF6
• Assay Reference Genome Location: Chr.1:3489458 on build GRCh38
• Cytoband: 1p36.32

Target Gene Details

• Entrez Gene ID: 1953
• Gene Name: multiple EGF like domains 6
• Gene Aliases: EGFL3
• Location: Chr.1:3487942-3624757 on Build GRCh38
• Assay Gene Location: Within Exon 41

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MEGF6	NM_001409.3	37	5923	NP_001400.3
	XM_006710406.3	34	5558	XP_006710469.1
	XM_011540885.1	38	6228	XP_011539187.1
	XM_011540886.1	37	6099	XP_011539188.1
	XM_011540887.2	33	5436	XP_011539189.1
	XM_017000533.1	37	6096	XP_016856022.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2758915	Chr.1:3372374 - 3632289 on Build GRCh38	Gain	MEGF6 TPRG1L PRDM16 ARHGEF16 WRAP73 MIR551A
nsv470687	Chr.1:3356499 - 3763210 on Build GRCh38	Loss	CCDC27 MEGF6 TPRG1L TP73 TP73-AS1 PRDM16 ARHGEF16 WRAP73 MIR551A
nsv1012423	Chr.1:3477686 - 4747449 on Build GRCh38	Gain	CCDC27 C1orf174 TPRG1L TP73 TP73-AS1 ARHGEF16 WRAP73 DFFB LRRC47 LINC01346 MEGF6 LINC01134 LOC284661 CEP104 AJAP1 MIR551A SMIM1
nsv951959	Chr.1:3051037 - 3812036 on Build GRCh38	Deletion	CCDC27 TPRG1L TP73 TP73-AS1 ARHGEF16 WRAP73 LRRC47 MIR4251 MEGF6 LINC00982 LOC105378604 PRDM16 MIR551A SMIM1
esv3893545	Chr.1:3460878 - 3512044 on Build GRCh38	Loss	MEGF6 ARHGEF16
nsv830203	Chr.1:3446374 - 3607752 on Build GRCh38	Loss	MEGF6 ARHGEF16 MIR551A
nsv299	Chr.1:3476928 - 3512705 on Build GRCh38	Insertion	MEGF6 ARHGEF16

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix protein

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

calcium ion binding
protein binding