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See other C9ORF139 CNV Assays ›
Gene Symbol
C9orf139
Assay Reference Genome
Location

Chr.9:137036099 on build GRCh38
Cytoband
9q34.3
Assay ID Hs02000343_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 401563

Gene Name:

 chromosome 9 open reading frame 139

Gene Aliases:

 -

Location:

 Chr.9:137027464-137037770 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C9orf139 NM_207511.2 3 3132 NP_997394.1
XM_017014717.1 3 2097 XP_016870206.1
AK093587.1 2 1501 BAC04202.1
AK124899.1 3 3132 BAC85986.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss MIR3621 GRIN1 SAPCD2 LRRC26 C9orf142 TMEM210 PRR31 PTGDS MAN1B1-AS1 LCNL1 NPDC1 MAN1B1 C9orf139 CLIC3 ENTPD2 FUT7 LOC101930307 ABCA2 DPP7 UAP1L1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss MIR3621 FAM166A LRRC26 C9orf142 C8G SSNA1 NRARP NELFB LCNL1 NOXA1 CCDC183-AS1 LOC101930307 MIR7114 PNPLA7 LCN12 C9orf173-AS1 RNF224 PHPT1 TRAF2 C9orf172 ANAPC2 NPDC1 C9orf139 TUBB4B EXD3 ENTPD2 FUT7 MIR4479 ENTPD8 TOR4A DPP7 NDOR1 NSMF SLC34A3 TMEM203 CYSRT1 EDF1 MAN1B1 TPRN MIR4292 CCDC183 ABCA2 UAP1L1 GRIN1 SAPCD2 FBXW5 TMEM210 PRR31 PTGDS MAMDC4 MAN1B1-AS1 RNF208 STPG3 RABL6 CLIC3
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion SAPCD2 LCN12 C9orf142 C8G PRR31 PTGDS MAN1B1-AS1 LCNL1 NPDC1 MAN1B1 C9orf139 CLIC3 ENTPD2 FUT7 LOC101930307 ABCA2 DPP7 UAP1L1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss C9orf163 SNORA17A MIR3621 LCN8 LRRC26 NALT1 C9orf142 C8G CARD9 LCN15 SNHG7 LCNL1 MIR4674 CCDC183-AS1 MIR4673 LOC101930307 MIR126 TMEM141 LCN12 SEC16A PHPT1 TRAF2 C9orf172 FAM69B NPDC1 C9orf139 INPP5E ENTPD2 FUT7 SNORA17B MIR4479 AGPAT2 DPP7 LOC100128593 EGFL7 LCN10 LINC01451 NOTCH1 EDF1 MIR6722 MAN1B1 MIR4292 CCDC183 ABCA2 UAP1L1 GRIN1 SAPCD2 SDCCAG3 FBXW5 TMEM210 PMPCA DNLZ PRR31 PTGDS MAMDC4 SNAPC4 LCN6 MAN1B1-AS1 HSPC324 RABL6 CLIC3
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain MIR3621 GRIN1 SAPCD2 LRRC26 TMEM210 SSNA1 MAN1B1-AS1 ANAPC2 NPDC1 MAN1B1 C9orf139 ENTPD2 FUT7 LOC101930307 DPP7 UAP1L1
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion SNORA17A MIR3621 LCN8 FAM166A LRRC26 C9orf142 C8G SSNA1 NRARP LCN15 NELFB SNHG7 LCNL1 CCDC183-AS1 LOC101930307 MIR126 TMEM141 LCN12 C9orf173-AS1 RNF224 PHPT1 TRAF2 C9orf172 FAM69B ANAPC2 NPDC1 C9orf139 TUBB4B EXD3 ENTPD2 FUT7 SNORA17B MIR4479 AGPAT2 TOR4A DPP7 LOC100128593 EGFL7 LCN10 NDOR1 LINC01451 SLC34A3 TMEM203 CYSRT1 EDF1 MIR6722 MAN1B1 TPRN MIR4292 CCDC183 ABCA2 UAP1L1 GRIN1 SAPCD2 FBXW5 TMEM210 PRR31 PTGDS MAMDC4 LCN6 MAN1B1-AS1 HSPC324 RNF208 STPG3 RABL6 CLIC3
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss NPDC1 C9orf139 ENTPD2 FUT7 ABCA2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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