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See other RGL2 CNV Assays ›
Gene Symbol
RGL2
Assay Reference Genome
Location

Chr.6:33293318 on build GRCh38
Cytoband
6p21.32
Assay ID Hs02003075_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5863

Gene Name:

 ral guanine nucleotide dissociation stimulator like 2

Gene Aliases:

 HKE1.5, KE1.5, RAB2L

Location:

 Chr.6:33291654-33299388 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 15 - Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RGL2 NM_001243738.1 NP_001230667.1
NM_004761.4 NP_004752.1
XM_011514781.1 XP_011513083.1
XM_011514785.2 XP_011513087.1
AB012295.1 BAA36193.1
AK095967.1
AL050259.1 CAB43361.1
BC000316.1 AAH00316.1
BC005037.1 AAH05037.1
BC032681.1 AAH32681.1
BC040989.1 AAH40989.1
BX648015.1
U68142.1 AAC50818.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830635 Chr.6:33270228 - 33446010 on Build GRCh38 Loss MIR5004 RPS18 PHF1 TAPBP CUTA ZBTB22 RGL2 MIR6834 SYNGAP1 WDR46 MIR6873 KIFC1 B3GALT4 DAXX VPS52 PFDN6
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion C6orf10 HCG24 LY6G5B MIR219A1 HCG25 BTNL2 SNORA38 HCP5 MIR6873 KIFC1 RXRB SNORD84 LSM2 LTB SLC44A4 APOM LOC100287329 PPP1R2P1 HCG23 C6orf25 MIR6832 ABHD16A SKIV2L LST1 PPT2 PSMB8-AS1 ATF6B PBX2 DDAH2 DDX39B-AS1 STK19 NELFE MIR4646 LY6G6E MICB C4B HLA-DQB1 MIR5004 RING1 HSPA1L LOC101929163 VWA7 HLA-DQB1-AS1 HSPA1B HLA-DPB2 HSPA1A MCCD1 MSH5-SAPCD1 B3GALT4 PPT2-EGFL8 MIR3135B RNF5 MIR6721 LOC102725068 HLA-DRA HLA-DQA2 AGER HLA-DOA PRRT1 AGPAT1 HLA-DMA TNF HLA-DQA1 SNORD52 WDR46 LY6G5C ATP6V1G2 C6orf47 ZBTB9 FKBPL NCR3 HLA-DOB PHF1 VARS CUTA LOC100294145 C4A TAP2 DAXX MIR1236 VPS52 PFDN6 NFKBIL1 HLA-DMB SAPCD1-AS1 CYP21A1P HLA-DRB6 TAPBP ZBTB22 RGL2 CLIC1 GPSM3 MSH5 PSMB9 GPANK1 SYNGAP1 MIR6833 LTA LOC100507547 TNXB HSD17B8 RPS18 LY6G6F TNXA DDX39B CFB DXO CSNK2B PSMB8 MIR6834 HLA-DQB2 COL11A2 PRRC2A NOTCH4 ZBTB12 C2-AS1 SAPCD1 LY6G6C HCG26 C2 HLA-DPB1 HLA-DRB1 EGFL8 TAP1 SNORD48 SNORD117 C6orf48 CYP21A2 HLA-DPA1 NEU1 ATP6V1G2-DDX39B BRD2 BAG6 AIF1 EHMT2 HLA-DRB5 LY6G6D SLC39A7
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion C6orf10 HCG24 LY6G5B MIR219A1 HCG25 BTNL2 SNORA38 HCP5 MIR6873 KIFC1 RXRB SNORD84 LSM2 LTB SLC44A4 APOM LOC100287329 PPP1R2P1 HCG23 C6orf25 MIR6832 ABHD16A SKIV2L LST1 PPT2 PSMB8-AS1 ATF6B PBX2 DDAH2 DDX39B-AS1 STK19 NELFE MIR4646 LY6G6E MICB C4B HLA-DQB1 MIR5004 RING1 HSPA1L LOC101929163 VWA7 HLA-DQB1-AS1 HSPA1B HLA-DPB2 HSPA1A MCCD1 MSH5-SAPCD1 B3GALT4 PPT2-EGFL8 MIR3135B RNF5 MIR6721 LOC102725068 HLA-DRA HLA-DQA2 AGER HLA-DOA PRRT1 AGPAT1 HLA-DMA TNF HLA-DQA1 SNORD52 WDR46 LY6G5C ATP6V1G2 C6orf47 ZBTB9 FKBPL NCR3 HLA-DOB PHF1 VARS CUTA LOC100294145 C4A TAP2 DAXX MIR1236 VPS52 PFDN6 NFKBIL1 HLA-DMB SAPCD1-AS1 CYP21A1P HLA-DRB6 TAPBP ZBTB22 RGL2 CLIC1 GPSM3 MSH5 PSMB9 GPANK1 SYNGAP1 MIR6833 LTA LOC100507547 TNXB HSD17B8 RPS18 LY6G6F TNXA DDX39B CFB DXO CSNK2B PSMB8 MIR6834 HLA-DQB2 COL11A2 PRRC2A NOTCH4 ZBTB12 C2-AS1 SAPCD1 LY6G6C HCG26 C2 HLA-DPB1 HLA-DRB1 EGFL8 TAP1 SNORD48 SNORD117 C6orf48 CYP21A2 HLA-DPA1 NEU1 ATP6V1G2-DDX39B BRD2 BAG6 AIF1 EHMT2 HLA-DRB5 LY6G6D SLC39A7
nsv830634 Chr.6:33193440 - 33362968 on Build GRCh38 Loss RPS18 RING1 TAPBP ZBTB22 RGL2 MIR219A1 HCG25 MIR6834 WDR46 MIR6873 RXRB B3GALT4 DAXX VPS52 PFDN6 HSD17B8 SLC39A7
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion MIR5004 RPS18 RING1 HLA-DOB PHF1 CUTA LOC100294145 HCG24 PSMB8 MIR219A1 HCG25 HLA-DQB1-AS1 TAP2 MIR6834 HLA-DQB2 HLA-DPB2 COL11A2 MIR6873 KIFC1 RXRB B3GALT4 MIR3135B DAXX PPP1R2P1 VPS52 PFDN6 HLA-DPB1 HLA-DMB HLA-DQA2 TAP1 PSMB8-AS1 HLA-DPA1 TAPBP HLA-DOA ZBTB22 BRD2 HLA-DMA RGL2 HLA-DQA1 PSMB9 SYNGAP1 WDR46 ZBTB9 HSD17B8 HLA-DQB1 SLC39A7

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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