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See other BRICD5 CNV Assays ›
Gene Symbol
BRICD5
Assay Reference Genome
Location

Chr.16:2209266 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02006845_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 283870

Gene Name:

 BRICHOS domain containing 5

Gene Aliases:

 C16orf79

Location:

 Chr.16:2209253-2213037 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BRICD5 NM_182563.3 NP_872369.2
XM_005255263.4 XP_005255320.1
BC039154.2 AAH39154.1

Target Gene Details

Entrez Gene ID:

 64223

Gene Name:

 MTOR associated protein, LST8 homolog

Gene Aliases:

 GBL, GbetaL, LST8, POP3, WAT1

Location:

 Chr.16:2205177-2209417 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MLST8 NM_001199173.1 9 1731 NP_001186102.1
NM_001199174.1 9 1570 NP_001186103.1
NM_001199175.1 9 1758 NP_001186104.1
NM_022372.4 9 1761 NP_071767.3
XM_005255475.3 9 1537 XP_005255532.2
XM_005255478.2 9 1742 XP_005255535.1
XM_005255479.2 9 1669 XP_005255536.1
XM_017023548.1 9 1726 XP_016879037.1
XM_017023549.1 9 1467 XP_016879038.1
XM_017023551.1 9 1776 XP_016879040.1
AF195883.1 6 1082 AAF04308.1
AI933692.1 1 171
AK021536.1 9 1730
AK022227.1 8 1415 BAB13990.1
AK098762.1 9 1666
AK123195.1 2 1536
AY223837.1 8 1571 AAO73410.1
BC001313.2 9 1451 AAH01313.1
BC017119.1 8 1462 AAH17119.1
BC052292.1 8 1985 AAH52292.1
BC088354.1 9 1479 AAH88354.1
BQ014640.1 1 167

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571200 Chr.16:2209190 - 2244889 on Build GRCh38 Loss DNASE1L2 PGP MLST8 ECI1 E4F1 BRICD5
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TBL3 LOC100134368 PRR25 NME4 TSR3 ATP6V0C SNHG9 LOC105371184 MRPS34 MIR5587 LOC105371046 RPS2 LOC729652 MIR3180-5 METRN NTN3 SPSB3 MIR662 ABCA17P PRSS29P RAB26 MIR6859-4 LUC7L RNF151 PGP HBQ1 LOC101929280 FAHD1 MPG WDR24 IGFALS RHBDF1 GNPTG CCNF C16orf91 MEIOB LMF1-AS1 DECR2 NTHL1 SLC9A3R2 BRICD5 TBC1D24 RGS11 DNASE1L2 CCDC154 CCDC78 RAB40C EME2 MIR6768 GNG13 PTX4 NME3 ZNF598 MIR3677 SNHG19 SNORD60 HBA2 SOX8 FBXL16 SNORA10 HN1L MIR4516 MSRB1 MLST8 CEMP1 E4F1 LOC100287175 NDUFB10 SSTR5-AS1 LOC105371038 LOC105371045 MRPL28 TPSG1 FAM234A NPRL3 MIR6767 HBZ AXIN1 LINC00235 AMDHD2 RHBDL1 UBE2I ARHGDIG FAM173A PRR35 WDR90 MIR1225 ABCA3 TSC2 LOC107987233 NOXO1 MIR3178 DDX11L10 SNRNP25 RAB11FIP3 CRAMP1 TMEM204 FLJ42627 CAPN15 TRAF7 MIR3176 LOC105371049 SSTR5 PIGQ CASKIN1 NARFL STUB1 RPL3L PRSS27 NPW MIR940 PKD1 SYNGR3 RPL23AP5 MIR3177 LMF1 MCRIP2 LOC107984876 CHTF18 MAPK8IP3 JMJD8 TMEM8A ERVK13-1 MSLN WASIR2 PDIA2 TPSB2 CLCN7 MIR4717 HAGHL PDPK1 TPSAB1 TPSD1 LOC105371047 C1QTNF8 LINC00254 C16orf59 POLR3K LOC652276 UNKL RHOT2 MIR6511B1 HAGH GFER HBA1 HS3ST6 SNORA78 SNORA64 WFIKKN1 IFT140 RPUSD1 ECI1 CACNA1H KCTD5 HBM RNPS1 NUBP2 BAIAP3 METTL26 TELO2 NHLRC4 LOC106660606
dgv4859n54 Chr.16:1971892 - 2264400 on Build GRCh38 Loss TBL3 DNASE1L2 ZNF598 MIR3180-5 SNHG19 SNORD60 MIR1225 TSC2 RAB26 MIR6511B1 NOXO1 GFER MIR4516 PGP MLST8 TRAF7 ECI1 E4F1 RNPS1 LOC105371049 CASKIN1 NPW PKD1 NTHL1 SYNGR3 SLC9A3R2 BRICD5
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss DNASE1L2 MIR4516 PGP MLST8 TRAF7 ECI1 E4F1 LOC105371049 CASKIN1 MIR3180-5 PKD1 SNHG19 SNORD60 MIR1225 TSC2 RAB26 BRICD5 MIR6511B1
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss DNASE1L2 PGP MLST8 TRAF7 ECI1 E4F1 RNPS1 CASKIN1 MIR940 MIR3677 SNHG19 SNORD60 LOC106660606 RAB26 BRICD5
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain DNASE1L2 MIR6767 MIR6768 ATP6V0C AMDHD2 MIR4717 PDPK1 LOC729652 MIR3180-5 NTN3 C16orf59 MIR3677 ABCA17P LOC652276 SNHG19 SNORD60 MIR1225 ABCA3 TSC2 RAB26 MIR6511B1 MIR3178 MIR4516 PGP MLST8 TRAF7 ECI1 CEMP1 E4F1 RNPS1 LOC105371049 CASKIN1 CCNF MIR940 PKD1 LOC106660606 BRICD5 TBC1D24
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss CASKIN1 DNASE1L2 MIR940 PGP MIR3677 MLST8 TRAF7 ECI1 LOC106660606 E4F1 BRICD5 RNPS1
nsv1711 Chr.16:2199093 - 2232650 on Build GRCh38 Insertion PGP MLST8 E4F1 BRICD5
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion DNASE1L2 PGP MLST8 TRAF7 ECI1 E4F1 RNPS1 MIR4717 CASKIN1 MIR940 MIR3677 SNHG19 SNORD60 LOC106660606 ABCA3 RAB26 BRICD5

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