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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1299884 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02020491_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 SCNN1D ACAP3 MIR6726
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC102725121 TMEM240 SAMD11 MIR429 TMEM88B CDK11B LOC107985729 SSU72 NADK MIR6723 OR4F29 LOC105378948 CDK11A B3GALT6 MTND2P28 PUSL1 MIR6727 MIR6859-2 LOC105378947 CALML6 TTLL10-AS1 SLC35E2B MXRA8 LOC100132287 MIR6859-1 TNFRSF18 LOC100133331 ISG15 TMEM52 AURKAIP1 ATAD3A LOC105378592 LOC100134822 MIR6808 MIR200A FAM138A LOC102724312 CPSF3L ATAD3B LOC100288069 PRKCZ DDX11L1 LOC107984841 MMP23B OR4F5 TAS1R3 DVL1 FNDC10 TNFRSF4 SLC35E2 MIR200B LOC100506504 KLHL17 VWA1 GABRD SCNN1D LOC100130417 CCNL2 GNB1 LINC01128 FAM41C LOC100288175 LINC01342 CPTP ATAD3C PLEKHN1 HES4 LOC100287934 PERM1 ANKRD65 NOC2L LOC105378589 MRPL20 ACAP3 MTND1P23 TTLL10 SDF4 LOC107985728 MIB2 FAM87B MIR6726 CFAP74 LOC729737 MORN1 FAM132A WASH7P MMP23A LOC105378949 AGRN LOC284600 RNF223 C1orf159 LOC101928626 OR4F16 MIR1302-2 LOC148413 UBE2J2 SKI LINC00115 FAAP20 LOC100129534 LOC105378591
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss UBE2J2 SCNN1D SDF4 FAM132A ACAP3 MIR6726 B3GALT6
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss CPTP PUSL1 MIR6727 CPSF3L TAS1R3 MIR6808 ACAP3 DVL1 MIR6726
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF4 MIR429 SDF4 MIR200B TTLL10-AS1 MIR6726 UBE2J2 SCNN1D FAM132A MIR200A ACAP3 RNF223 TNFRSF18 C1orf159 TTLL10 LINC01342 B3GALT6
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TNFRSF4 MIR429 SDF4 MIR200B MIR6726 SCNN1D FAM132A LOC105378948 MIR200A AGRN RNF223 C1orf159 LOC100288175 LINC01342 B3GALT6 CPTP PUSL1 MIR6727 CPSF3L TTLL10-AS1 UBE2J2 TAS1R3 ACAP3 TNFRSF18 TTLL10
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion CPTP PUSL1 SCNN1D MIR6727 CPSF3L TAS1R3 MIR6808 ACAP3 DVL1 AURKAIP1 MIR6726 MXRA8
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss TMEM240 SAMD11 TNFRSF4 MIR429 TMEM88B CDK11B LOC107985729 SLC35E2 MIR200B KLHL17 VWA1 SCNN1D SSU72 NADK LOC100130417 CCNL2 LOC105378948 CDK11A LINC01128 FAM41C LOC100288175 LINC01342 B3GALT6 CPTP ATAD3C PLEKHN1 PUSL1 HES4 MIR6727 LOC100287934 PERM1 ANKRD65 TTLL10-AS1 NOC2L SLC35E2B MXRA8 MRPL20 ACAP3 TNFRSF18 TTLL10 ISG15 SDF4 LOC107985728 MIB2 AURKAIP1 FAM87B MIR6726 ATAD3A FAM132A MMP23A MIR6808 MIR200A AGRN LOC284600 RNF223 C1orf159 LOC102724312 CPSF3L ATAD3B LOC100288069 LOC148413 UBE2J2 MMP23B TAS1R3 LINC00115 DVL1 FNDC10
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion TMEM240 TNFRSF4 MIR429 SDF4 TMEM88B CDK11B LOC107985729 MIB2 MIR200B AURKAIP1 MIR6726 VWA1 ATAD3A SCNN1D SSU72 FAM132A CCNL2 MIR6808 MIR200A C1orf159 LINC01342 B3GALT6 CPTP ATAD3C PUSL1 MIR6727 LOC102724312 CPSF3L ATAD3B ANKRD65 TTLL10-AS1 LOC148413 MXRA8 UBE2J2 MRPL20 MMP23B TAS1R3 ACAP3 DVL1 FNDC10 TNFRSF18 TTLL10
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain CPTP PUSL1 SCNN1D MIR6727 CPSF3L TAS1R3 MIR6808 ACAP3 DVL1 MIR6726 MXRA8
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss CPTP PUSL1 MIR6727 CPSF3L AURKAIP1 MIR6726 MXRA8 UBE2J2 SCNN1D TAS1R3 MIR6808 ACAP3 DVL1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain ISG15 SAMD11 TNFRSF4 MIR429 SDF4 TMEM88B LOC107985728 MIR200B AURKAIP1 MIR6726 KLHL17 SCNN1D LOC100130417 FAM132A CCNL2 MIR6808 LOC105378948 MIR200A AGRN LOC284600 RNF223 C1orf159 LOC100288175 LINC01342 B3GALT6 CPTP PLEKHN1 PUSL1 HES4 MIR6727 CPSF3L PERM1 ANKRD65 TTLL10-AS1 LOC148413 NOC2L MXRA8 UBE2J2 MRPL20 TAS1R3 ACAP3 DVL1 TNFRSF18 TTLL10
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain PUSL1 TNFRSF4 MIR429 SDF4 MIR6727 CPSF3L MIR200B TTLL10-AS1 MIR6726 UBE2J2 SCNN1D FAM132A MIR200A ACAP3 TNFRSF18 TTLL10 B3GALT6

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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