Genomic Map
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Target Gene Details
Entrez Gene ID: | 27439 |
Gene Name: | cat eye syndrome chromosome region, candidate 6 |
Gene Aliases: |
- |
Location: |
Chr.22:17116299-17121367 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CECR6 | NM_001163079.1 | 2 | 1810 | NP_001156551.1 |
| NM_031890.3 | 1 | 2874 | NP_114096.1 | |
| XM_011546124.2 | XP_011544426.1 | |||
| XM_011546125.2 | 2 | 2220 | XP_011544427.1 | |
| AF307451.1 | 1 | 2804 | AAK30049.1 | |
| AK055398.1 | 1 | 156 | ||
| AK095437.1 | 1 | 677 | ||
| AK095609.1 | 2 | 1804 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv828924 | Chr.22:17116393 - 17174153 on Build GRCh38 | Gain |
 CECR6
CECR5-AS1
CECR5
LOC100996342
|
| esv3647204 | Chr.22:16939332 - 17123705 on Build GRCh38 | Gain |
CECR6
GAB4
CECR7
IL17RA
LOC100996342
|
| dgv4460n100 | Chr.22:16384224 - 17135620 on Build GRCh38 | Gain |
CECR6
GAB4
CECR7
LOC101929350
XKR3
IL17RA
CCT8L2
ANKRD62P1-PARP4P3
LOC100996342
ACTR3BP6
TPTEP1
HSFY1P1
|
| nsv1064641 | Chr.22:16757380 - 17233805 on Build GRCh38 | Gain |
CECR6
CECR5-AS1
GAB4
CECR7
XKR3
CECR5
IL17RA
LOC100996342
CECR1
HSFY1P1
|
| esv3647208 | Chr.22:17069325 - 17142761 on Build GRCh38 | Gain |
CECR6
CECR5
IL17RA
LOC100996342
|
| nsv509805 | Chr.22:17081417 - 17267685 on Build GRCh38 | Insertion |
CECR6
CECR5-AS1
CECR3
CECR5
IL17RA
LOC100996342
CECR1
|
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Additional Information:
For this assay, SNP(s) [rs145297979] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
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