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See other HAGH CNV Assays ›
Gene Symbol
HAGH
Assay Reference Genome
Location

Chr.16:1809228 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02030189_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3029

Gene Name:

 hydroxyacylglutathione hydrolase

Gene Aliases:

 GLO2, GLX2, GLXII, HAGH1

Location:

 Chr.16:1809099-1827194 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGH NM_001040427.1 10 1485 NP_001035517.1
NM_001286249.1 8 1280 NP_001273178.1
NM_005326.4 9 1389 NP_005317.2
XM_011522469.2 9 1093 XP_011520771.1
XM_011522470.2 8 982 XP_011520772.1
XM_017023195.1 9 1018 XP_016878684.1
AK054943.1 3 1352
AK290155.1 9 954
AK298174.1 8 920
AK299173.1 9 1020
AK299993.1 9 1020
BC000840.1 9 1009 AAH00840.1
BC002627.2 9 1338
X90999.1 8 874 CAA62483.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv517196 Chr.16:1729694 - 1844960 on Build GRCh38 Gain+Loss MIR3177 MAPK8IP3 NME3 NUBP2 IGFALS EME2 MEIOB SPSB3 FAHD1 MRPS34 HAGH
nsv571175 Chr.16:1806439 - 1875278 on Build GRCh38 Loss MEIOB FAHD1 HAGH
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss CRAMP1 MAPK8IP3 NUBP2 IGFALS HN1L SPSB3 MRPS34 MIR3177 LOC105371046 NME3 EME2 IFT140 HAGH
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TPSAB1 AXIN1 LINC00235 MCRIP2 LINC00254 SNORD60 TBL3 METTL26 CASKIN1 MIR1225 NME4 RPL23AP5 C16orf59 BRICD5 MLST8 NTN3 CHTF18 LOC105371049 HS3ST6 ERVK13-1 CACNA1H LOC729652 NHLRC4 PRR35 HBA1 MIR6768 ARHGDIG SLC9A3R2 ECI1 ZNF598 E4F1 TPSG1 SNHG9 CRAMP1 CCNF CLCN7 FLJ42627 MRPS34 LOC652276 NTHL1 NOXO1 RPUSD1 RNPS1 RGS11 HBM NME3 MIR4717 CEMP1 SNORA64 MIR3176 UBE2I RHBDF1 SSTR5 LOC107987233 AMDHD2 MEIOB LOC105371184 PTX4 PRR25 PDIA2 RNF151 TSC2 SSTR5-AS1 JMJD8 GNG13 CCDC78 MIR6511B1 SNORA78 MAPK8IP3 PGP SNORA10 HN1L SPSB3 ABCA3 LOC105371047 TMEM8A ATP6V0C MIR3177 RPL3L DDX11L10 PRSS29P LOC105371046 NARFL HBA2 TELO2 MIR6767 LMF1 LOC100134368 GNPTG METRN PKD1 HAGH DECR2 RPS2 WFIKKN1 C1QTNF8 LOC107984876 LOC105371038 TMEM204 MIR5587 PRSS27 BAIAP3 TPSD1 KCTD5 UNKL RAB26 TBC1D24 HBQ1 TPSB2 NPRL3 MIR662 STUB1 PIGQ CCDC154 NPW HAGHL TSR3 CAPN15 IGFALS SNHG19 FBXL16 MSRB1 WASIR2 MIR940 HBZ FAHD1 SNRNP25 RHOT2 RAB11FIP3 RAB40C C16orf91 NDUFB10 MPG MSLN LUC7L NUBP2 SYNGR3 POLR3K MRPL28 MIR3180-5 WDR90 LOC100287175 LOC105371045 MIR3677 PDPK1 MIR4516 MIR3178 MIR6859-4 TRAF7 EME2 WDR24 FAM234A SOX8 RHBDL1 FAM173A LOC101929280 IFT140 LMF1-AS1 ABCA17P GFER DNASE1L2 LOC106660606
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss MAPK8IP3 NME3 NUBP2 IGFALS EME2 SPSB3 MRPS34 HAGH
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss CRAMP1 MAPK8IP3 TMEM204 NUBP2 IGFALS HN1L MEIOB SPSB3 FAHD1 MRPS34 LOC105371047 MIR3177 LOC105371046 NME3 EME2 IFT140 TELO2 HAGH
nsv1042986 Chr.16:1784723 - 1866102 on Build GRCh38 Loss NUBP2 IGFALS MEIOB FAHD1 HAGH
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss CRAMP1 MAPK8IP3 NUBP2 IGFALS HN1L MEIOB SPSB3 FAHD1 MRPS34 MIR3177 NME3 EME2 HAGH
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MIR3177 MAPK8IP3 NME3 NUBP2 IGFALS EME2 SPSB3 FAHD1 MRPS34 HAGH

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