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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:884073 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02035001_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CHID1 POLR2L LOC171391 CEND1 PDDC1 PANO1 RPLP2 PIDD1 AP2A2 CRACR2B CD151 PNPLA2 TSPAN4 SLC25A22 SNORA52
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss CHID1 LOC101927503 AP2A2 MUC6
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss POLR2L PANO1 RNH1 PIDD1 TOLLIP PHRF1 CRACR2B TOLLIP-AS1 MIR6744 DEAF1 MUC5AC SCT DRD4 TSPAN4 SLC25A22 LMNTD2 LOC143666 MUC2 EPS8L2 CHID1 LOC171391 CEND1 PDDC1 MIR210HG RPLP2 CDHR5 LOC101927503 AP2A2 IRF7 SIGIRR LRRC56 CD151 RASSF7 MIR210 MUC5B TMEM80 HRAS ANO9 PNPLA2 LOC101059906 TALDO1 SNORA52 PTDSS2 MUC6
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion POLR2L B4GALNT4 PANO1 RNH1 PKP3 PIDD1 PHRF1 CRACR2B DEAF1 SCT DRD4 TSPAN4 SLC25A22 LMNTD2 LOC143666 EPS8L2 CHID1 LOC171391 CEND1 PDDC1 MIR210HG RPLP2 CDHR5 AP2A2 IRF7 SIGIRR LRRC56 CD151 RASSF7 MIR210 TMEM80 HRAS ANO9 PNPLA2 LOC101059906 TALDO1 SNORA52 PTDSS2
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion CHID1 MOB2 LOC101927503 TOLLIP AP2A2 BRSK2 TOLLIP-AS1 MIR6744 MUC5B MUC5AC TSPAN4 MUC2 MUC6
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion POLR2L PANO1 RNH1 PIDD1 PHRF1 CRACR2B DEAF1 SCT DRD4 TSPAN4 SLC25A22 LMNTD2 LOC143666 EPS8L2 CHID1 LOC171391 CEND1 PDDC1 MIR210HG RPLP2 CDHR5 IRF7 LRRC56 CD151 RASSF7 MIR210 TMEM80 HRAS PNPLA2 LOC101059906 TALDO1 SNORA52 PTDSS2
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss POLR2L B4GALNT4 PANO1 RNH1 PKP3 PIDD1 TOLLIP PHRF1 CRACR2B MIR6744 DEAF1 MUC5AC SCT DRD4 TSPAN4 SLC25A22 LMNTD2 LOC143666 MUC2 EPS8L2 CHID1 LOC171391 CEND1 PDDC1 MIR210HG RPLP2 CDHR5 LOC101927503 AP2A2 IRF7 SIGIRR LRRC56 CD151 RASSF7 MIR210 MUC5B TMEM80 HRAS ANO9 PNPLA2 LOC101059906 TALDO1 SNORA52 PTDSS2 MUC6
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain CHID1 TSPAN4 AP2A2 MUC6
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion CHID1 MOB2 LOC101927503 TOLLIP AP2A2 BRSK2 TOLLIP-AS1 MIR6744 MUC5B MUC5AC TSPAN4 MUC2 MUC6
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss CHID1 POLR2L CRACR2B CD151 RPLP2 PNPLA2 TSPAN4 PIDD1 SNORA52 AP2A2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CHID1 POLR2L LOC171391 CEND1 PDDC1 PANO1 RPLP2 PIDD1 CRACR2B CD151 PNPLA2 TSPAN4 SLC25A22 SNORA52
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CHID1 POLR2L CRACR2B CD151 PNPLA2 TSPAN4
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CHID1 POLR2L LOC171391 CEND1 PDDC1 PANO1 RPLP2 PIDD1 CRACR2B CD151 PNPLA2 TALDO1 TSPAN4 SLC25A22 SNORA52

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