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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:884073 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02035001_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss CHID1 LOC101927503 AP2A2 MUC6
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PNPLA2 PDDC1 CHID1 TSPAN4 CRACR2B CD151 SNORA52 POLR2L SLC25A22 PIDD1 PANO1 LOC171391 CEND1 RPLP2 AP2A2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC5B PNPLA2 PDDC1 CHID1 CRACR2B LOC101059906 DEAF1 CD151 EPS8L2 LMNTD2 POLR2L LRRC56 SLC25A22 PIDD1 PANO1 ANO9 LOC171391 PTDSS2 LOC143666 PHRF1 MUC5AC CEND1 SIGIRR RPLP2 MUC6 HRAS TALDO1 TSPAN4 TMEM80 RNH1 MUC2 TOLLIP-AS1 SNORA52 MIR210 IRF7 SCT RASSF7 TOLLIP MIR210HG CDHR5 MIR6744 LOC101927503 DRD4 AP2A2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PNPLA2 PDDC1 B4GALNT4 CHID1 CRACR2B LOC101059906 DEAF1 CD151 EPS8L2 LMNTD2 POLR2L PKP3 LRRC56 SLC25A22 PIDD1 PANO1 ANO9 LOC171391 PTDSS2 LOC143666 PHRF1 CEND1 SIGIRR RPLP2 HRAS TALDO1 TSPAN4 TMEM80 RNH1 SNORA52 MIR210 IRF7 SCT RASSF7 MIR210HG CDHR5 DRD4 AP2A2
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MUC5B CHID1 TSPAN4 MUC2 TOLLIP-AS1 BRSK2 MOB2 TOLLIP MUC5AC MIR6744 LOC101927503 AP2A2 MUC6
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PNPLA2 PDDC1 CHID1 CRACR2B LOC101059906 DEAF1 CD151 EPS8L2 LMNTD2 POLR2L LRRC56 SLC25A22 PIDD1 PANO1 LOC171391 PTDSS2 LOC143666 PHRF1 CEND1 RPLP2 HRAS TALDO1 TSPAN4 TMEM80 RNH1 SNORA52 MIR210 IRF7 SCT RASSF7 MIR210HG CDHR5 DRD4
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC5B PNPLA2 PDDC1 B4GALNT4 CHID1 CRACR2B LOC101059906 DEAF1 CD151 EPS8L2 LMNTD2 POLR2L PKP3 LRRC56 SLC25A22 PIDD1 PANO1 ANO9 LOC171391 PTDSS2 LOC143666 PHRF1 MUC5AC CEND1 SIGIRR RPLP2 MUC6 HRAS TALDO1 TSPAN4 TMEM80 RNH1 MUC2 SNORA52 MIR210 IRF7 SCT RASSF7 TOLLIP MIR210HG CDHR5 MIR6744 LOC101927503 DRD4 AP2A2
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain CHID1 TSPAN4 AP2A2 MUC6
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MUC5B CHID1 TSPAN4 MUC2 TOLLIP-AS1 BRSK2 MOB2 TOLLIP MUC5AC MIR6744 LOC101927503 AP2A2 MUC6
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss PNPLA2 CHID1 TSPAN4 CRACR2B CD151 SNORA52 POLR2L RPLP2 AP2A2 PIDD1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PNPLA2 PDDC1 CHID1 TSPAN4 CRACR2B CD151 SNORA52 POLR2L SLC25A22 PIDD1 PANO1 LOC171391 CEND1 RPLP2
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain PNPLA2 CHID1 TSPAN4 CRACR2B CD151 POLR2L
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PNPLA2 PDDC1 TALDO1 CHID1 TSPAN4 CRACR2B CD151 SNORA52 POLR2L SLC25A22 PIDD1 PANO1 LOC171391 CEND1 RPLP2

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