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See other MIR6872 CNV Assays ›
Gene Symbol
MIR6872
Assay Reference Genome
Location

Chr.3:50273351 on build GRCh38
Cytoband
3p21.31
Assay ID Hs02051387_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 102465526

Gene Name:

 microRNA 6872

Gene Aliases:

 hsa-mir-6872

Location:

 Chr.3:50273236-50273297 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MIR6872 NR_106932.1

Target Gene Details

Entrez Gene ID:

 7869

Gene Name:

 semaphorin 3B

Gene Aliases:

 LUCA-1, SEMA5, SEMAA, SemA, semaV

Location:

 Chr.3:50267558-50277171 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SEMA3B NM_001005914.2 NP_001005914.1
NM_001290060.1 NP_001276989.1
NM_001290061.1 NP_001276990.1
NM_001290062.1 1 233 NP_001276991.1
NM_001290063.1 NP_001276992.1
NM_004636.3 NP_004627.1
NR_110697.1
AB083186.1 BAB88870.1
AB209322.1 BAD92559.1
AF217991.1 AAG17234.1
AK092182.1 BAC03823.1
AK098329.1
AK293678.1
AK308875.1
BC009113.1 AAH09113.1
BC013975.2 AAH13975.1
BC024220.2 AAH24220.1
BC044602.1 1 195 AAH44602.1
DC330072.1 1 233
U28369.1 AAD09138.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv523560 Chr.3:50134964 - 50314769 on Build GRCh38 Loss GNAI2 MIR5787 IFRD2 SLC38A3 LSMEM2 SEMA3B HYAL1 SEMA3F-AS1 LOC107986035 MIR566 GNAT1 MIR6872 SEMA3F SEMA3B-AS1 NAT6 HYAL3
esv2759148 Chr.3:50161045 - 50333946 on Build GRCh38 Loss GNAI2 MIR5787 IFRD2 SLC38A3 LSMEM2 SEMA3B HYAL1 HYAL2 MIR566 GNAT1 RASSF1 MIR6872 TUSC2 SEMA3F SEMA3B-AS1 NAT6 HYAL3
dgv602n27 Chr.3:50140578 - 50287241 on Build GRCh38 Loss GNAT1 MIR6872 GNAI2 MIR5787 SLC38A3 LSMEM2 SEMA3F SEMA3B SEMA3F-AS1 SEMA3B-AS1 LOC107986035 MIR566
dgv8317n54 Chr.3:50206077 - 50383123 on Build GRCh38 Loss CYB561D2 GNAI2 MIR5787 IFRD2 CACNA2D2 SLC38A3 LSMEM2 SEMA3B HYAL1 HYAL2 NPRL2 RASSF1 MIR6872 RASSF1-AS1 TUSC2 TMEM115 SEMA3B-AS1 ZMYND10 NAT6 HYAL3
dgv8316n54 Chr.3:50115923 - 50299991 on Build GRCh38 Loss GNAI2 MIR5787 IFRD2 SLC38A3 LSMEM2 SEMA3B HYAL1 SEMA3F-AS1 LOC107986035 MIR566 GNAT1 MIR6872 RBM5 SEMA3F SEMA3B-AS1 NAT6 HYAL3
nsv834692 Chr.3:50161052 - 50356033 on Build GRCh38 Loss CYB561D2 GNAI2 MIR5787 IFRD2 SLC38A3 LSMEM2 SEMA3B HYAL1 HYAL2 MIR566 NPRL2 GNAT1 RASSF1 MIR6872 RASSF1-AS1 TUSC2 SEMA3F TMEM115 SEMA3B-AS1 ZMYND10 NAT6 HYAL3
nsv834693 Chr.3:50251400 - 50470533 on Build GRCh38 Loss CYB561D2 GNAI2 IFRD2 CACNA2D2 LSMEM2 SEMA3B HYAL1 HYAL2 NPRL2 RASSF1 MIR6872 RASSF1-AS1 TUSC2 TMEM115 SEMA3B-AS1 ZMYND10 NAT6 HYAL3
nsv523662 Chr.3:50107518 - 50547568 on Build GRCh38 Loss CYB561D2 MIR5787 LSMEM2 MIR566 MIR6872 RASSF1-AS1 SEMA3B-AS1 ZMYND10 GNAI2 IFRD2 CACNA2D2 SLC38A3 SEMA3B HYAL1 SEMA3F-AS1 LOC107986035 HYAL2 NPRL2 GNAT1 RASSF1 RBM5 TUSC2 SEMA3F TMEM115 NAT6 HYAL3
nsv470561 Chr.3:50121341 - 50547568 on Build GRCh38 Loss CYB561D2 MIR5787 LSMEM2 MIR566 MIR6872 RASSF1-AS1 SEMA3B-AS1 ZMYND10 GNAI2 IFRD2 CACNA2D2 SLC38A3 SEMA3B HYAL1 SEMA3F-AS1 LOC107986035 HYAL2 NPRL2 GNAT1 RASSF1 TUSC2 SEMA3F TMEM115 NAT6 HYAL3
nsv460531 Chr.3:50210391 - 50399396 on Build GRCh38 Loss CYB561D2 GNAI2 MIR5787 IFRD2 CACNA2D2 SLC38A3 LSMEM2 SEMA3B HYAL1 HYAL2 NPRL2 RASSF1 MIR6872 RASSF1-AS1 TUSC2 TMEM115 SEMA3B-AS1 ZMYND10 NAT6 HYAL3
nsv954855 Chr.3:50152468 - 50439169 on Build GRCh38 Deletion CYB561D2 MIR5787 LSMEM2 MIR566 MIR6872 RASSF1-AS1 SEMA3B-AS1 ZMYND10 GNAI2 IFRD2 CACNA2D2 SLC38A3 SEMA3B HYAL1 SEMA3F-AS1 LOC107986035 HYAL2 NPRL2 GNAT1 RASSF1 TUSC2 SEMA3F TMEM115 NAT6 HYAL3

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