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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30642193 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02056704_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 NP_001026892.1
NM_001190724.2 NP_001177653.1
NM_001254952.2 NP_001241881.1
NM_001318762.1 NP_001305691.1
NM_001318763.1 NP_001305692.1
NM_024909.3 NP_079185.2
NR_033823.2
XM_005249415.2 XP_005249472.1
XM_011514918.2 XP_011513220.1
XM_017011316.1 XP_016866805.1
AB075512.1 BAE45758.1
AK023220.1 BAB14472.1
AK225107.1
AK297661.1
AK298743.1
AL535697.3
AL833858.1 CAD38717.1
BC006105.1 AAH06105.1
BC025755.1 AAH25755.1
BC047303.1 AAH47303.1
BX442806.2
CX786272.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion HLA-A CCHCR1 PPP1R18 TRIM39-RPP21 ZNRD1ASP MRPS18B HCG4B TRIM10 UBD OR5V1 OR12D3 GTF2H4 MUC21 MUC22 HCG22 OR11A1 OR14J1 PPP1R11 PPP1R10 GNL1 HLA-B TRIM15 LOC105375014 MOG PRR3 HLA-H ZFP57 RNF39 IER3 OR2H1 PSORS1C1 LINC01015 TRIM40 TUBB SNORD32B HLA-K HLA-E HLA-L MAS1L CDSN HLA-G TRIM26 OR2J2 OR10C1 HLA-J NRM C6orf15 HCG18 VARS2 DPCR1 GABBR1 HCG4 TRIM31-AS1 POU5F1 TRIM39 ZNRD1 HCG27 HCG9 HCG20 HLA-F ATAT1 HCG17 LINC00243 MICA DHX16 LOC554223 OR2H2 HCG8 C6orf136 LOC101929006 DDR1 TCF19 HLA-F-AS1 HLA-C PSORS1C3 TRIM31 MDC1-AS1 MDC1 MIR6891 FLOT1 IFITM4P RPP21 SFTA2 MIR4640 MIR877 ABCF1 OR12D2 PSORS1C2
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss PPP1R18 MRPS18B MDC1-AS1 MDC1 TUBB HCG20 FLOT1 ATAT1 PPP1R10 ABCF1 DHX16 NRM C6orf136 IER3
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss CCHCR1 VARS2 DPCR1 PPP1R18 MRPS18B POU5F1 HCG27 HCG20 GTF2H4 MUC21 MUC22 HCG22 ATAT1 LINC00243 PPP1R10 GNL1 DHX16 C6orf136 LOC105375014 PRR3 DDR1 TCF19 HLA-C IER3 PSORS1C3 PSORS1C1 MDC1-AS1 MDC1 TUBB HLA-E FLOT1 SFTA2 CDSN MIR4640 MIR877 ABCF1 NRM C6orf15 PSORS1C2
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion HLA-A CCHCR1 PPP1R18 TRIM39-RPP21 ZNRD1ASP MRPS18B HCG4B TRIM10 UBD HCG16 OR5V1 OR12D3 GTF2H4 MUC21 MUC22 HCG22 OR11A1 OR14J1 PPP1R11 PPP1R10 GNL1 ZNF311 TRIM15 LOC105375014 MOG PRR3 LINC00533 HLA-H ZFP57 RNF39 IER3 OR2H1 LOC100129636 PSORS1C1 LINC01015 TRIM40 LINC01556 TUBB SNORD32B HLA-K HLA-E HLA-L MAS1L CDSN HLA-G TRIM26 OR2J2 OR10C1 HLA-J NRM C6orf15 HCG18 OR2J3 VARS2 DPCR1 GABBR1 HCG4 TRIM31-AS1 POU5F1 TRIM39 ZNRD1 HCG27 HCG9 HCG20 HLA-F ATAT1 HCG14 HCG17 LINC00243 TRIM27 DHX16 LOC554223 OR2H2 HCG8 C6orf136 LOC101929006 DDR1 TCF19 HLA-F-AS1 PSORS1C3 TRIM31 MDC1-AS1 MDC1 FLOT1 IFITM4P RPP21 OR2W1 SFTA2 LINC01623 MIR4640 MIR877 ABCF1 OR12D2 OR2B3 PSORS1C2
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion HLA-A CCHCR1 PPP1R18 TRIM39-RPP21 ZNRD1ASP MRPS18B HCG4B TRIM10 GTF2H4 MUC21 MUC22 HCG22 PPP1R11 PPP1R10 GNL1 TRIM15 LOC105375014 PRR3 HLA-H RNF39 IER3 PSORS1C1 TRIM40 TUBB HLA-K HLA-E HLA-L CDSN HLA-G TRIM26 HLA-J NRM C6orf15 HCG18 VARS2 DPCR1 HCG4 TRIM31-AS1 POU5F1 TRIM39 ZNRD1 HCG27 HCG9 HCG20 HLA-F ATAT1 HCG17 LINC00243 DHX16 LOC554223 HCG8 C6orf136 DDR1 TCF19 HLA-F-AS1 HLA-C PSORS1C3 TRIM31 MDC1-AS1 MDC1 FLOT1 IFITM4P RPP21 SFTA2 MIR4640 MIR877 ABCF1 PSORS1C2
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss HLA-A CCHCR1 PPP1R18 TRIM39-RPP21 ZNRD1ASP MRPS18B HCG4B TRIM10 GTF2H4 MUC21 MUC22 HCG22 PPP1R11 PPP1R10 GNL1 TRIM15 LOC105375014 PRR3 HLA-H RNF39 IER3 PSORS1C1 TRIM40 TUBB HLA-K HLA-E HLA-L CDSN TRIM26 HLA-J NRM C6orf15 HCG18 VARS2 DPCR1 TRIM31-AS1 POU5F1 TRIM39 ZNRD1 HCG27 HCG9 HCG20 ATAT1 HCG17 LINC00243 DHX16 HCG8 C6orf136 DDR1 TCF19 HLA-C PSORS1C3 TRIM31 MDC1-AS1 MDC1 FLOT1 RPP21 SFTA2 MIR4640 MIR877 ABCF1 PSORS1C2
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion CCHCR1 VARS2 DPCR1 PPP1R18 MRPS18B POU5F1 HCG27 HCG20 GTF2H4 MUC21 MUC22 HCG22 ATAT1 LINC00243 PPP1R10 GNL1 DHX16 C6orf136 LOC105375014 PRR3 DDR1 TCF19 HLA-C IER3 PSORS1C3 PSORS1C1 MDC1-AS1 MDC1 TUBB HLA-E FLOT1 SFTA2 CDSN MIR4640 MIR877 ABCF1 NRM C6orf15 PSORS1C2
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion VARS2 DPCR1 PPP1R18 MRPS18B HCG20 GTF2H4 MUC21 MUC22 HCG22 ATAT1 LINC00243 PPP1R10 GNL1 DHX16 C6orf136 LOC105375014 PRR3 DDR1 IER3 MDC1-AS1 MDC1 TUBB FLOT1 SFTA2 MIR4640 MIR877 ABCF1 NRM
esv2677891 Chr.6:30636339 - 30642449 on Build GRCh38 Deletion ATAT1
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication CCHCR1 PPP1R18 HCG26 TRIM39-RPP21 ZNRD1ASP MRPS18B TRIM10 GTF2H4 MUC21 MUC22 HCG22 PPP1R11 PPP1R10 GNL1 HLA-B TRIM15 LOC105375014 PRR3 RNF39 IER3 HCP5 PSORS1C1 TRIM40 TUBB HLA-E HLA-L CDSN TRIM26 HLA-J NRM C6orf15 LOC102725068 HCG18 VARS2 DPCR1 TRIM31-AS1 POU5F1 TRIM39 ZNRD1 HCG27 HCG20 ATAT1 HCG17 LINC00243 MICA DHX16 HCG8 C6orf136 DDR1 TCF19 HLA-C PSORS1C3 TRIM31 MDC1-AS1 MDC1 MIR6891 FLOT1 RPP21 SFTA2 MIR4640 MIR877 ABCF1 PSORS1C2
esv3608513 Chr.6:30636336 - 30642406 on Build GRCh38 Loss ATAT1

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