Hs02057148_cn

• Gene Symbol: ADGRA1
• Assay Reference Genome Location: Chr.10:133084927 on build GRCh38
• Cytoband: 10q26.3

Target Gene Details

• Entrez Gene ID: 84435
• Gene Name: adhesion G protein-coupled receptor A1
• Gene Aliases: GPR123
• Location: Chr.10:133070929-133131675 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ADGRA1	XM_005252695.1	8	1493	XP_005252752.1
	AY181241.1	8	1493	AAO27353.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv998n100	Chr.10:132998894 - 133170978 on Build GRCh38	Gain	ADGRA1 KNDC1 ADGRA1-AS1
esv2759793	Chr.10:133030918 - 133619181 on Build GRCh38	Gain+Loss	SYCE1 MTG1 SCART1 SPRN ADAM8 SPRNP1 CYP2E1 KNDC1 VENTX CALY MIR202 TUBGCP2 ADGRA1-AS1 ADGRA1 MIR3944 FUOM PAOX ECHS1 UTF1 PRAP1 MIR202HG ZNF511
dgv1464n54	Chr.10:132900981 - 133134139 on Build GRCh38	Gain	CFAP46 ADGRA1 LINC01167 LINC01168 LINC01166 ADGRA1-AS1
esv3625022	Chr.10:132998655 - 133120915 on Build GRCh38	Gain	ADGRA1 ADGRA1-AS1
nsv1054934	Chr.10:130334322 - 133158679 on Build GRCh38	Gain	CFAP46 JAKMIP3 PPP2R2D LRRC27 NKX6-2 STK32C LINC01168 LINC01164 TCERG1L LINC01166 ADGRA1-AS1 ADGRA1 PWWP2B DPYSL4 LINC01167 C10orf91 LOC105378568 LOC107984282 BNIP3 INPP5A TCERG1L-AS1 MIR378C
esv3625015	Chr.10:132889012 - 133114687 on Build GRCh38	Gain	CFAP46 ADGRA1 LINC01167 LINC01168 LINC01166 ADGRA1-AS1
nsv528260	Chr.10:132859348 - 133620799 on Build GRCh38	Loss	SCART1 ADAM8 SPRNP1 KNDC1 VENTX MIR202 ADGRA1-AS1 MIR3944 LINC01167 FUOM ECHS1 PRAP1 SYCE1 CFAP46 MTG1 SPRN CYP2E1 LINC01168 CALY LINC01166 TUBGCP2 ADGRA1 PAOX UTF1 MIR202HG ZNF511
nsv552526	Chr.10:132699017 - 133103793 on Build GRCh38	Gain	CFAP46 ADGRA1 LINC01167 NKX6-2 INPP5A LINC01168 LINC01166 ADGRA1-AS1
nsv470979	Chr.10:133033478 - 133118280 on Build GRCh38	Loss	ADGRA1 ADGRA1-AS1
nsv952703	Chr.10:133037897 - 133143896 on Build GRCh38	Deletion	ADGRA1 ADGRA1-AS1
esv3625027	Chr.10:133082541 - 133084963 on Build GRCh38	Loss	ADGRA1
nsv552539	Chr.10:133061918 - 133103793 on Build GRCh38	Loss	ADGRA1 ADGRA1-AS1

More Information

Additional Information:

For this assay, SNP(s) [rs114900682] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor

Gene Ontology Categories:

Process(es)

signal transduction
cell surface receptor signaling pathway
G-protein coupled receptor signaling pathway

Function(s)

G-protein coupled receptor activity