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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1773741 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02058750_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 NP_001244299.1
XM_017023025.1 XP_016878514.1
XM_017023026.1 XP_016878515.1
AK074080.2 BAB84906.2
EF452422.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss SPSB3 NUBP2 NME3 EME2 MAPK8IP3 MRPS34 MIR3177
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication WDR24 LOC107984876 METRN TPSAB1 PDPK1 MIR3176 NDUFB10 TPSD1 WDR90 LOC105371184 SSTR5 LUC7L NHLRC4 PTX4 CCDC78 SPSB3 MIR3677 TELO2 EME2 RHOT2 MLST8 MIR6859-4 KCTD5 UBE2I MIR3177 MIR662 HBM LMF1 TRAF7 ABCA3 MIR3178 PRR35 LOC100134368 SNORA64 SNHG19 LINC00254 LOC101929280 MSLN METTL26 RNPS1 DDX11L10 RPUSD1 RPL23AP5 TSR3 PRSS27 MIR5587 ATP6V0C LOC105371045 GFER NOXO1 TPSG1 MIR6768 E4F1 NME4 SNRNP25 NTHL1 RAB40C RHBDL1 MCRIP2 NTN3 ERVK13-1 RNF151 RAB11FIP3 LOC105371046 NPRL3 FLJ42627 MAPK8IP3 FAM173A MIR3180-5 FAM234A MSRB1 C1QTNF8 HS3ST6 WASIR2 PRR25 HAGH MRPL28 TSC2 WFIKKN1 LOC107987233 STUB1 BRICD5 GNPTG HBQ1 LOC105371047 AMDHD2 RGS11 GNG13 CLCN7 IGFALS CACNA1H PIGQ TPSB2 NPW RHBDF1 SYNGR3 IFT140 CHTF18 LINC00235 HN1L ABCA17P HBA1 RPS2 SNORA78 SOX8 LOC105371049 CAPN15 NME3 DNASE1L2 MEIOB TMEM204 MIR4516 TMEM8A HAGHL NARFL C16orf91 ARHGDIG JMJD8 DECR2 MIR940 LOC100287175 SSTR5-AS1 MIR1225 AXIN1 C16orf59 PDIA2 PRSS29P CCDC154 MIR6767 BAIAP3 SNHG9 FBXL16 NUBP2 SNORD60 MRPS34 LOC652276 RAB26 LOC729652 TBC1D24 LOC106660606 POLR3K LOC105371038 UNKL PGP RPL3L LMF1-AS1 MIR6511B1 CCNF SNORA10 ECI1 CEMP1 HBA2 FAHD1 MPG TBL3 CASKIN1 MIR4717 SLC9A3R2 CRAMP1 ZNF598 HBZ PKD1
esv3892756 Chr.16:1764390 - 1780436 on Build GRCh38 Loss SPSB3 NME3 EME2 MAPK8IP3 MRPS34
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion SPSB3 NUBP2 NME3 EME2 MAPK8IP3 MRPS34 IGFALS MIR3177
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss SPSB3 NUBP2 NME3 EME2 MAPK8IP3 MRPS34 IGFALS
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss HN1L LOC105371046 MAPK8IP3 IGFALS SPSB3 NUBP2 NME3 EME2 HAGH MRPS34 IFT140 CRAMP1 MIR3177
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss SPSB3 NUBP2 NME3 EME2 MAPK8IP3 MRPS34 IGFALS
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss MEIOB TMEM204 HN1L LOC105371047 LOC105371046 MAPK8IP3 IGFALS FAHD1 SPSB3 NUBP2 NME3 TELO2 EME2 HAGH MRPS34 IFT140 CRAMP1 MIR3177
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain SPSB3 NUBP2 NME3 EME2 MAPK8IP3 MRPS34 IGFALS
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MEIOB HN1L MAPK8IP3 IGFALS FAHD1 SPSB3 NUBP2 NME3 EME2 HAGH MRPS34 CRAMP1 MIR3177
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss SPSB3 NME3 EME2 MAPK8IP3 MRPS34
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion FAHD1 SPSB3 NUBP2 NME3 EME2 HAGH MAPK8IP3 MRPS34 IGFALS MIR3177
nsv571170 Chr.16:1752231 - 1791032 on Build GRCh38 Loss SPSB3 NUBP2 NME3 EME2 MAPK8IP3 MRPS34 IGFALS

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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