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See other MADCAM1 CNV Assays ›
Gene Symbol
MADCAM1
Assay Reference Genome
Location

Chr.19:504788 on build GRCh38
Cytoband
19p13.3
Assay ID Hs02077671_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8174

Gene Name:

 mucosal vascular addressin cell adhesion molecule 1

Gene Aliases:

 MACAM1

Location:

 Chr.19:496490-505343 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MADCAM1 NM_130760.2 NP_570116.2
NM_130762.2 NP_570118.1
AK092211.1
AY732484.1 AAV33123.1
AY819760.1 AAV68345.1
BC136408.1
BC137506.1
BC137507.1
BC142629.1
BC144065.1
DB323303.1
DQ076657.1 AAY82472.1
U43628.1 AAB02194.1
U82483.1 AAC13661.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516566 Chr.19:495722 - 525739 on Build GRCh38 Gain MADCAM1 TPGS1
esv3574264 Chr.19:490245 - 516350 on Build GRCh38 Gain MADCAM1 TPGS1 ODF3L2
nsv509712 Chr.19:391096 - 558643 on Build GRCh38 Insertion SHC2 GZMM MADCAM1 CDC34 TPGS1 ODF3L2 C2CD4C
dgv6155n54 Chr.19:404077 - 519032 on Build GRCh38 Loss SHC2 MADCAM1 TPGS1 ODF3L2 C2CD4C
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain SHC2 PLPP2 BSG LOC101929060 CDC34 TPGS1 HCN2 MIER2 C2CD4C PRSS57 GZMM MADCAM1 THEG RNF126 ODF3L2 FSTL3 POLRMT FGF22
dgv1013e212 Chr.19:416231 - 521269 on Build GRCh38 Gain SHC2 MADCAM1 TPGS1 ODF3L2
esv33417 Chr.19:474104 - 518906 on Build GRCh38 Gain+Loss MADCAM1 TPGS1 ODF3L2
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain SHC2 BSG LOC101929060 MISP CDC34 TPGS1 HCN2 MIER2 C2CD4C PRSS57 LOC101928450 GZMM MADCAM1 THEG RNF126 PALM ODF3L2 FSTL3 POLRMT FGF22
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion SHC2 ELANE BSG LOC105372235 MIR3187 ABCA7 MISP MIR4745 TMEM259 GRIN3B TPGS1 WDR18 HCN2 PTBP1 GPX4 PRSS57 LOC101928450 GZMM KISS1R THEG RNF126 ODF3L2 FSTL3 ARHGAP45 MED16 ARID3A CNN2 CFD PRTN3 CDC34 RNU6-9 R3HDM4 AZU1 C2CD4C POLR2E PLPPR3 RNU6-2 MADCAM1 PALM POLRMT FGF22
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss SHC2 ELANE BSG LOC105372235 MIR3187 MISP MIR4745 GRIN3B TPGS1 WDR18 HCN2 PTBP1 PRSS57 LOC101928450 GZMM KISS1R RNF126 ODF3L2 FSTL3 MED16 ARID3A CFD PRTN3 CDC34 RNU6-9 R3HDM4 AZU1 C2CD4C PLPPR3 MADCAM1 PALM POLRMT FGF22
esv28250 Chr.19:470703 - 521323 on Build GRCh38 Gain+Loss MADCAM1 TPGS1 ODF3L2

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