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See other MADCAM1 CNV Assays ›
Gene Symbol
MADCAM1
Assay Reference Genome
Location

Chr.19:504788 on build GRCh38
Cytoband
19p13.3
Assay ID Hs02077671_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8174

Gene Name:

 mucosal vascular addressin cell adhesion molecule 1

Gene Aliases:

 MACAM1

Location:

 Chr.19:496490-505343 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MADCAM1 NM_130760.2 NP_570116.2
NM_130762.2 NP_570118.1
AK092211.1
AY732484.1 AAV33123.1
AY819760.1 AAV68345.1
BC136408.1
BC137506.1
BC137507.1
BC142629.1
BC144065.1
DB323303.1
DQ076657.1 AAY82472.1
U43628.1 AAB02194.1
U82483.1 AAC13661.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516566 Chr.19:495722 - 525739 on Build GRCh38 Gain MADCAM1 TPGS1
nsv509712 Chr.19:391096 - 558643 on Build GRCh38 Insertion C2CD4C MADCAM1 TPGS1 GZMM SHC2 CDC34 ODF3L2
esv3574264 Chr.19:490245 - 516350 on Build GRCh38 Gain MADCAM1 TPGS1 ODF3L2
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain C2CD4C FSTL3 TPGS1 MIER2 LOC101929060 POLRMT SHC2 FGF22 PRSS57 THEG ODF3L2 HCN2 MADCAM1 GZMM PLPP2 RNF126 CDC34 BSG
dgv6155n54 Chr.19:404077 - 519032 on Build GRCh38 Loss C2CD4C MADCAM1 TPGS1 SHC2 ODF3L2
dgv1013e212 Chr.19:416231 - 521269 on Build GRCh38 Gain MADCAM1 TPGS1 SHC2 ODF3L2
esv33417 Chr.19:474104 - 518906 on Build GRCh38 Gain+Loss MADCAM1 TPGS1 ODF3L2
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain C2CD4C FSTL3 TPGS1 MIER2 LOC101929060 POLRMT SHC2 FGF22 PALM PRSS57 THEG ODF3L2 LOC101928450 HCN2 MADCAM1 GZMM RNF126 CDC34 MISP BSG
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion KISS1R FSTL3 RNU6-2 POLRMT ELANE FGF22 PALM PRTN3 PRSS57 LOC101928450 CNN2 WDR18 HCN2 MIR3187 MADCAM1 LOC105372235 RNF126 TMEM259 MISP PTBP1 GPX4 ARHGAP45 C2CD4C ABCA7 TPGS1 CFD SHC2 AZU1 THEG ODF3L2 PLPPR3 RNU6-9 MED16 GRIN3B ARID3A GZMM R3HDM4 CDC34 POLR2E MIR4745 BSG
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss KISS1R FSTL3 POLRMT ELANE FGF22 PALM PRTN3 PRSS57 LOC101928450 WDR18 HCN2 MIR3187 MADCAM1 LOC105372235 RNF126 MISP PTBP1 C2CD4C TPGS1 CFD SHC2 AZU1 ODF3L2 PLPPR3 RNU6-9 MED16 GRIN3B ARID3A GZMM R3HDM4 CDC34 MIR4745 BSG
esv28250 Chr.19:470703 - 521323 on Build GRCh38 Gain+Loss MADCAM1 TPGS1 ODF3L2

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