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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88879435 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02088030_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK090985.1
AK097904.1 1 602
AK314766.1
BC047019.1
BC062624.1 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS TRAPPC2L PIEZO1 CDT1 PABPN1L LOC105371409 CBFA2T3 LOC101927793 LOC107987238 APRT LOC100129697
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CTU2 GALNS TRAPPC2L ZNF778 LOC100289580 CDT1 LOC339059 LOC105371409 LOC101927793 MIR4722 CDH15 SLC22A31 LOC400558 ACSF3 PIEZO1 LINC00304 PABPN1L CBFA2T3 LOC107987238 APRT LOC100129697
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion PABPN1L CBFA2T3 LOC101927793
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss GALNS TRAPPC2L CDT1 LOC105371409 LOC101927793 CDH15 SLC22A31 LOC400558 ACSF3 LINC00304 PABPN1L CBFA2T3 LOC107987238 APRT LOC100129697
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain GALNS TRAPPC2L ZNF778 LOC100289580 CDT1 LOC339059 LOC105371409 LOC101927793 CDH15 ANKRD11 SLC22A31 LOC400558 ACSF3 PIEZO1 LOC100287036 LINC00304 PABPN1L CBFA2T3 LOC105371414 LOC107987238 APRT LOC100129697
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain GALNS TRAPPC2L PIEZO1 CDT1 PABPN1L CBFA2T3 LOC101927793 LOC107987238 APRT
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS TRAPPC2L CDT1 PABPN1L LOC105371409 CBFA2T3 LOC101927793 LOC107987238 APRT LOC100129697
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss GALNS TRAPPC2L CDT1 LOC105371409 LOC101927793 CDH15 LOC400558 ACSF3 LINC00304 PABPN1L CBFA2T3 LOC107987238 APRT LOC100129697
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CTU2 GALNS MVD CDT1 IL17C LOC339059 MC1R LOC105371409 SPATA33 LOC101927793 MIR4722 CDH15 ACSF3 GAS8-AS1 ZNF276 PRDM7 PABPN1L LOC105371414 LOC100129697 LOC107984817 TRAPPC2L ZNF778 CENPBD1 FANCA SPG7 RNF166 DPEP1 TUBB8P7 LOC400558 SPATA2L LOC100287036 CPNE7 LOC101927817 DBNDD1 LINC00304 LOC107987238 SNAI3-AS1 LOC100289580 VPS9D1-AS1 DEF8 FAM157C URAHP SLC22A31 PIEZO1 SNORD68 LOC105371419 SPIRE2 AFG3L1P TCF25 CYBA CDK10 VPS9D1 GAS8 TUBB3 ANKRD11 CHMP1A CBFA2T3 RPL13 APRT SNAI3
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain GALNS TRAPPC2L PABPN1L CBFA2T3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain CTU2 GALNS TRAPPC2L LOC100289580 CDT1 LOC339059 LOC105371409 LOC101927793 MIR4722 PIEZO1 PABPN1L CBFA2T3 LOC107987238 APRT LOC100129697

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