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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88879435 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02088030_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK090985.1
AK097904.1 1 602
AK314766.1
BC047019.1
BC062624.1 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC105371409 APRT PIEZO1 LOC101927793 LOC100129697 TRAPPC2L CBFA2T3 PABPN1L CDT1 LOC107987238 GALNS
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain APRT LINC00304 PIEZO1 LOC101927793 LOC100129697 SLC22A31 LOC400558 TRAPPC2L ZNF778 CDH15 GALNS LOC105371409 MIR4722 CTU2 ACSF3 CBFA2T3 PABPN1L CDT1 LOC100289580 LOC339059 LOC107987238
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion LOC101927793 CBFA2T3 PABPN1L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss APRT LINC00304 LOC101927793 LOC100129697 SLC22A31 LOC400558 TRAPPC2L CDH15 GALNS LOC105371409 ACSF3 CBFA2T3 PABPN1L CDT1 LOC107987238
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC100287036 APRT LINC00304 PIEZO1 LOC101927793 LOC100129697 LOC105371414 SLC22A31 LOC400558 TRAPPC2L ZNF778 CDH15 GALNS LOC105371409 ACSF3 ANKRD11 CBFA2T3 PABPN1L CDT1 LOC100289580 LOC339059 LOC107987238
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain APRT PIEZO1 LOC101927793 TRAPPC2L CBFA2T3 PABPN1L CDT1 LOC107987238 GALNS
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss APRT LINC00304 LOC101927793 LOC100129697 LOC400558 TRAPPC2L CDH15 GALNS LOC105371409 ACSF3 CBFA2T3 PABPN1L CDT1 LOC107987238
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC105371409 APRT LOC101927793 LOC100129697 TRAPPC2L CBFA2T3 PABPN1L CDT1 LOC107987238 GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC100287036 SPATA33 LINC00304 SNAI3 LOC101927793 DEF8 ZNF276 FANCA CPNE7 GAS8-AS1 MIR4722 SNORD68 VPS9D1-AS1 ANKRD11 AFG3L1P CENPBD1 DBNDD1 CDT1 LOC100129697 FAM157C TUBB3 TRAPPC2L SPIRE2 ACSF3 TUBB8P7 LOC100289580 MC1R LOC105371414 TCF25 MVD RPL13 LOC400558 DPEP1 CDH15 GALNS LOC105371409 URAHP CHMP1A CBFA2T3 LOC107984817 LOC107987238 APRT PIEZO1 GAS8 IL17C SNAI3-AS1 SLC22A31 RNF166 ZNF778 LOC105371419 CYBA VPS9D1 CTU2 CDK10 LOC101927817 SPATA2L PABPN1L PRDM7 SPG7 LOC339059
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain TRAPPC2L CBFA2T3 PABPN1L GALNS
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain APRT PIEZO1 LOC101927793 TRAPPC2L GALNS MIR4722 CTU2 CBFA2T3 PABPN1L CDT1 LOC100289580 LOC339059 LOC107987238

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