Name: [Hs02090556_cn] [SMARCD2]
Creator: Thermo Fisher Scientific
Keywords: [SMARCD2] Assay, [SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	6603
Gene Name:	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
Gene Aliases:	BAF60B, CRACD2, PRO2451, Rsc6p
Location:	Chr.17:63832081-63842991 on Build GRCh38
Assay Gene Location:	Within Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SMARCD2	NM_001098426.1	10	1571	NP_001091896.1
	XM_005257604.2	10	1118	XP_005257661.2
	XM_017024967.1	10	2310	XP_016880456.1
	AK025917.1	2	135
	AK300939.1	10	1355
	AK303951.1	10	1157
	AK307944.1	10	1124
	BC136322.1	11	1440
	BC142963.1	10	1520
	U66618.1	10	1514	AAC50696.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833510	Chr.17:63767293 - 63927790 on Build GRCh38	Loss	GH1 FTSJ3 CSHL1 CSH1 PSMC5 CCDC47 SMARCD2 DDX42 GH2 CSH2 TCAM1P LOC107987248
nsv517272	Chr.17:63814307 - 64020132 on Build GRCh38	Gain+Loss	GH1 FTSJ3 CSHL1 PRR29 ICAM2 GH2 PRR29-AS1 CD79B CSH1 PSMC5 SMARCD2 SCN4A DDX42 CSH2 TCAM1P LOC107987248
nsv510720	Chr.17:63809351 - 63908780 on Build GRCh38	Deletion	FTSJ3 CSH1 PSMC5 SMARCD2 DDX42 GH2 CSH2 TCAM1P LOC107987248