Name: [Hs02091010_cn] [TRMU]
Creator: Thermo Fisher Scientific
Keywords: [TRMU] Assay, [tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	55687
Gene Name:	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Aliases:	LCAL3, MTO2, MTU1, TRMT, TRMT1, TRNT1
Location:	Chr.22:46335401-46357340 on Build GRCh38
Assay Gene Location:	Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRMU	NM_001282782.1	1	329	NP_001269711.1
	NM_001282783.1	1	329	NP_001269712.1
	NM_001282784.1	1	329	NP_001269713.1
	NM_001282785.1	1	329	NP_001269714.1
	NM_018006.4	1	329	NP_060476.2
	NR_104240.1	1	329
	NR_104241.1	1	329
	XM_005261678.1			XP_005261735.1
	XM_005261681.1			XP_005261738.1
	XM_011530272.1			XP_011528574.1
	XM_011530273.1			XP_011528575.1
	AB178028.1			BAD66875.1
	AK001002.1			BAA91462.1
	AK290712.1
	AK295173.1
	AY062123.2	1	305	AAL38183.1
	BC027991.1
	CN365141.1
	CR456445.1			CAG30331.1
	DN997542.1	1	420
	DQ309998.1	1	305	ABC46690.1
	DQ309999.1	1	305	ABC46691.1
	DQ310000.1	1	305	ABC46692.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv829293	Chr.22:46241054 - 46741639 on Build GRCh38	Gain	TRMU PKDREJ GTSE1-AS1 CERK CELSR1 PPARA GRAMD4 CDPF1 GTSE1 TTC38
nsv829281	Chr.22:45861485 - 46735858 on Build GRCh38	Gain	MIRLET7BHG GTSE1-AS1 MIRLET7B CERK LOC642648 CELSR1 MIR3619 LOC107985535 WNT7B TRMU PKDREJ PRR34 LINC00899 PPARA LOC730668 MIR4763 PRR34-AS1 GRAMD4 CDPF1 MIRLET7A3 GTSE1 TTC38
nsv834225	Chr.22:46323584 - 46510799 on Build GRCh38	Loss	TRMU CELSR1 GTSE1
nsv1066139	Chr.22:46310352 - 46352592 on Build GRCh38	Gain	TRMU GTSE1
nsv471214	Chr.22:46278315 - 46367774 on Build GRCh38	Loss	TRMU GTSE1-AS1 CELSR1 GTSE1 TTC38
esv3647951	Chr.22:46324981 - 46344914 on Build GRCh38	Loss	TRMU GTSE1